RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 FASTKD3Q14CZ7 662 aaKnown RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 MORF4L2Q15014 288 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 C5orf22Q49AR2 442 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 RARS2Q5T160 578 aaKnown RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 TPGS1Q6ZTW0 290 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 PID1Q7Z2X4 250 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 PPIL6Q8IXY8 311 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 AZIN2Q96A70 460 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 KLHL8Q9P2G9 620 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 DPP7Q9UHL4 492 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 MRPS23Q9Y3D9 190 aaKnown RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 SH3BP1Q9Y3L3 701 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 TTLL3Q9Y4R7 772 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 ACTL7AQ9Y615 435 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 CLUHO75153 1309 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 ZBTB24O43167 697 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 RAMP2O60895 175 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 AVILO75366 819 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 JCHAINP01591 159 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 CD68P34810 354 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 HSD17B3P37058 310 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 OLIG2Q13516 323 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 MSS51Q4VC12 460 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 CNTD1Q8N815 330 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 UBLCP1Q8WVY7 318 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 GORASP1Q9BQQ3 440 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 EPB41L4BQ9H329 900 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 IPO11Q9UI26 975 aaKnown RBP17.23■□□□□ 0.35
NELFCD-201ENST00000460601 ARHGAP26Q9UNA1 814 aa17.23■□□□□ 0.35
NELFCD-201ENST00000460601 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 CCNB1P14635 433 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 GRIA1P42261 906 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 NDST2P52849 883 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 FAM193AP78312 1265 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 MTA1Q13330 715 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 POLD3Q15054 466 aaPredicted RBP17.22■□□□□ 0.35
NELFCD-201ENST00000460601 ARHGAP15Q53QZ3 475 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 FSCBQ5H9T9 825 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 RABGAP1LQ5R372 815 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 ZCCHC9Q8N567 271 aaKnown RBP17.22■□□□□ 0.35
NELFCD-201ENST00000460601 OR7D4Q8NG98 312 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 OR2W6PQ8NHA6 318 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 WFDC5Q8TCV5 224 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 RBM15Q96T37 977 aaKnown RBP eCLIP17.22■□□□□ 0.352e-8■■■■□ 19.7
NELFCD-201ENST00000460601 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 PIH1D1Q9NWS0 290 aaKnown RBP17.22■□□□□ 0.35
NELFCD-201ENST00000460601 SHOC2Q9UQ13 582 aa17.22■□□□□ 0.35
NELFCD-201ENST00000460601 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
NELFCD-201ENST00000460601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 TBL1XO60907 577 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 GLDCP23378 1020 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 HTR3DQ70Z44 454 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 UHMK1Q8TAS1 419 aaKnown RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 PABPC5Q96DU9 382 aaKnown RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 LRRC4CQ9HCJ2 640 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 LSM7Q9UK45 103 aaKnown RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 CLEC4EQ9ULY5 219 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 OPHN1O60890 802 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 PEX11BO96011 259 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 CCNCP24863 283 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 PMS2P54278 862 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 CDH4P55283 916 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 CAV1Q03135 178 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 MREGQ8N565 214 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 C9orf72Q96LT7 481 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 TSGA13Q96PP4 275 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.35
NELFCD-201ENST00000460601 UBP1Q9NZI7 540 aa17.21■□□□□ 0.35
NELFCD-201ENST00000460601 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 GFRA2O00451 464 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 STK10O94804 968 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 FGF19O95750 216 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 NFKB1P19838 968 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 MAPKAPK2P49137 400 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 CXorf57Q6NSI4 855 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 PCGF5Q86SE9 256 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 CARNMT1Q8N4J0 409 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 TDRD5Q8NAT2 981 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 TMA16Q96EY4 203 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 BRD8Q9H0E9 1235 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 NSUN3Q9H649 340 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 MATN3O15232 486 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 CLDN11O75508 207 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms