RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RPRD1AQ96P16 312 aaPredicted RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 TLE6Q9H808 572 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 SLC28A3Q9HAS3 691 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 ETNK1Q9HBU6 452 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 ASAH2Q9NR71 780 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 FAM114A2Q9NRY5 505 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 TMEM248Q9NWD8 314 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 SEPT10Q9P0V9 454 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 CLEC1BQ9P126 229 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 WHRNQ9P202 907 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 STOML2Q9UJZ1 356 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 HPCAL4Q9UM19 191 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 UTP11Q9Y3A2 253 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 TRIOBPQ9H2D6 2365 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 TRANK1O15050 2925 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 RASA4BC9J798 803 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 TRIM24O15164 1050 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 ZBTB24O43167 697 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 RASA4O43374 803 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PPFIA2O75334 1257 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 AVILO75366 819 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 GAS8O95995 478 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 SHBGP04278 402 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 HLA-DQB2P05538 268 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 CKMP06732 381 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 DESP17661 470 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PTPN2P17706 415 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PSMB4P28070 264 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 MZF1P28698 734 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 HOXA9P31269 272 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 TNNT3P45378 269 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 RGRP47804 291 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 AP1B1Q10567 949 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 USP4Q13107 963 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 CASP8Q14790 479 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 GRIN2CQ14957 1233 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 ZNF77Q15935 545 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PABPC1LQ4VXU2 614 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 ANKRD20A2Q5SQ80 823 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 ANKRD20A1Q5TYW2 823 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 ANKRD20A3Q5VUR7 823 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 NUGGCQ68CJ6 796 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 NAIF1Q69YI7 327 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 UMODL1-AS1Q8N2C9 162 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.95□□□□□ -0.98
RIF1-208ENST00000457745 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 TFB1MQ8WVM0 346 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 MYLIPQ8WY64 445 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 RUBCNQ92622 972 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 MRPS31Q92665 395 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 HDAC11Q96DB2 347 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 MRPL38Q96DV4 380 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 SNF8Q96H20 258 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 OXNAD1Q96HP4 312 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 ZYG11BQ9C0D3 744 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 NACA2Q9H009 215 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 LINC00597Q9H2U6 94 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 SEMA4AQ9H3S1 761 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PDFQ9HBH1 243 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 HOMER3Q9NSC5 361 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 PIH1D1Q9NWS0 290 aaKnown RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 PLK2Q9NYY3 685 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
RIF1-208ENST00000457745 STK39Q9UEW8 545 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 NFS1Q9Y697 457 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 REV3LO60673 3130 aa8.95□□□□□ -0.98
RIF1-208ENST00000457745 BRWD1Q9NSI6 2320 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 A0A0A0MRY4 1105 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 TRAV19A0A0A6YYK7 116 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 C5orf60A6NFR6 353 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 F5H5T6 163 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 FGF10O15520 208 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 SNAP91O60641 907 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 TBL1XO60907 577 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 GCATO75600 419 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CD160O95971 181 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 JCHAINP01591 159 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 HNRNPA1P09651 372 aaKnown RBP eCLIP8.94□□□□□ -0.98
RIF1-208ENST00000457745 SLC2A3P11169 496 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 ZFXP17010 805 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 NFKB1P19838 968 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 FCARP24071 287 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CDC25CP30307 473 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 LTBRP36941 435 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 HSD17B3P37058 310 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 VIPR2P41587 438 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 NR2C2P49116 596 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 RGS19P49795 217 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 NIPAL4Q0D2K0 466 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 SLC10A7Q0GE19 358 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 MESP2Q0VG99 397 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CUL1Q13616 776 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 PDK1Q15118 436 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 ADGRF1Q5T601 910 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms