RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ARID3BQ8IVW6 561 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SIKE1Q9BRV8 207 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 ZNF395Q9H8N7 513 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 ABT1Q9ULW3 272 aaKnown RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 HBS1LQ9Y450 684 aaKnown RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 CABYRO75952 493 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 JCHAINP01591 159 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 LIMK2P53671 638 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 YWHAHQ04917 246 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 CDH17Q12864 832 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 HSF5Q4G112 596 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 CEP57Q86XR8 500 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 ARHGAP12Q8IWW6 846 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 LZTR1Q8N653 840 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 PRR11Q96HE9 360 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 APOL2Q9BQE5 337 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 C20orf27Q9GZN8 174 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SIK2Q9H0K1 926 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 WWP1Q9H0M0 922 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 RGS18Q9NS28 235 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 ARL8BQ9NVJ2 186 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SOX13Q9UN79 622 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 PLXNA3P51805 1871 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 MSI1O43347 362 aaKnown RBP17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CCDC22O60826 627 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 PRKCGP05129 697 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CALB2P22676 271 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 TYK2P29597 1187 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CCR1P32246 355 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 GRIK1P39086 918 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 PPP2R5DQ14738 602 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CERCAMQ5T4B2 595 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 ARTNQ5T4W7 220 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 TEDDM1Q5T9Z0 273 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 LINC00523Q86TU6 105 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 LONP2Q86WA8 852 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CNTD1Q8N815 330 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 FAM13CQ8NE31 585 aa17.02■□□□□ 0.32
CCDC43-202ENST00000457422 CEP350Q5VT06 3117 aa17.02■□□□□ 0.31
CCDC43-202ENST00000457422 DFFAO00273 331 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 FCHO1O14526 889 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 PAGE1O75459 146 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 EOMESO95936 686 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ALDH1A1P00352 501 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 PROCP04070 461 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 FGF3P11487 239 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 SERPINB8P50452 374 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 GTF2A1P52655 376 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 NRG1Q02297 640 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 DSC1Q08554 894 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 PCLAFQ15004 111 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ARHGAP36Q6ZRI8 547 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ZCCHC23Q6ZST2 131 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 SCD5Q86SK9 330 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 USP33Q8TEY7 942 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 CASP10Q92851 521 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 TBC1D31Q96DN5 1066 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 MCMBPQ9BTE3 642 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 CATSPERBQ9H7T0 1116 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 SNX15Q9NRS6 342 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 UBP1Q9NZI7 540 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 SFMBT1Q9UHJ3 866 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 MAGED2Q9UNF1 606 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 F7P08709 466 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 SLC39A12Q504Y0 691 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 STRA8Q7Z7C7 330 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ZNF280BQ86YH2 543 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 MFSD3Q96ES6 412 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 MIPEPQ99797 713 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 NMUR2Q9GZQ4 415 aa17.01■□□□□ 0.31
CCDC43-202ENST00000457422 AAR2Q9Y312 384 aaKnown RBP17.01■□□□□ 0.31
CCDC43-202ENST00000457422 ATP9BO43861 1147 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 DDHD2O94830 711 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 SERPINE1P05121 402 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 E2F5Q15329 346 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 CCDC153Q494R4 210 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 PPM1JQ5JR12 505 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 TTC7BQ86TV6 843 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 RTN4RL1Q86UN2 441 aaPredicted RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 KCNMB4Q86W47 210 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 PPP1R14CQ8TAE6 165 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 FCRL5Q96RD9 977 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 BTBD10Q9BSF8 475 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 KIFC1Q9BW19 673 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 ZCWPW1Q9H0M4 648 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms