RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 DCP1BQ8IZD4 617 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 UTP15Q8TED0 518 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 PLEKHG4BQ96PX9 1271 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 SPASTQ9UBP0 616 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 LNPEPQ9UIQ6 1025 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 SLC8A2Q9UPR5 921 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 NUP98P52948 1817 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 FAM237AA0A1B0GTK4 181 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 LSM1O15116 133 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 SPTLC1O15269 473 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 SERPIND1P05546 499 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 GSNP06396 782 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 ACRP10323 421 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 SELPP16109 830 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 ACO1P21399 889 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 KLRC2P26717 231 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 PCSK1P29120 753 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 RTP1P59025 263 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 FASTKQ14296 549 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 GPR107Q5VW38 600 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 DHDDSQ86SQ9 333 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 STX19Q8N4C7 294 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 UBASH3BQ8TF42 649 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 C12orf65Q9H3J6 166 aaKnown RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 DENND2DQ9H6A0 471 aaPredicted RBP9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 CERS4Q9HA82 394 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 ARL8BQ9NVJ2 186 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 DPP7Q9UHL4 492 aa9.93□□□□□ -0.82
MSC-AS1-201ENST00000457356 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 OGTO15294 1046 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 GSC2O15499 205 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PRPF4O43172 522 aaKnown RBP eCLIP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SNHG28P0DPA3 235 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 IMPDH2P12268 514 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CREB1P16220 341 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CYP2C18P33260 490 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 FDFT1P37268 417 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SLC16A1P53985 500 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 NR1H2P55055 460 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CRADDP78560 199 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PRKAA1Q13131 559 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 UBAP2LQ14157 1087 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 POU6F1Q14863 301 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ALYREFQ86V81 257 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ECHDC2Q86YB7 292 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PARP8Q8N3A8 854 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 FBXL16Q8N461 479 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 DGCR14Q96DF8 476 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 MARK4Q96L34 752 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 BDH2Q9BUT1 245 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ATXN3LQ9H3M9 355 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 H2AFY2Q9P0M6 372 aaPredicted RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SALL4Q9UJQ4 1053 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 MRPL42Q9Y6G3 142 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PIPSLA2A3N6 862 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CAPN8A6NHC0 703 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SLCO1B7G3V0H7 640 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 WNT7AO00755 349 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TRIM24O15164 1050 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 DDHD2O94830 711 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 MED26O95402 600 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 AKAP5P24588 427 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 GP5P40197 560 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 DRG2P55039 364 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 FOLH1Q04609 750 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 RGS21Q2M5E4 152 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ZRANB3Q5FWF4 1079 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CDCA2Q69YH5 1023 aaPredicted RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ZFP1Q6P2D0 407 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TTC27Q6P3X3 843 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 C4orf22Q6V702 233 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ZCCHC9Q8N567 271 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 FIG4Q92562 907 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 MCRS1Q96EZ8 462 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 MECRQ9BV79 373 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ABI2Q9NYB9 513 aaPredicted RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ATXN10Q9UBB4 475 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 COL1A1P02452 1464 aaPredicted RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ATXN2Q99700 1313 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PRR5-ARHGAP8B1AHC4 643 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 EDF1O60869 148 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CNOT3O75175 753 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SOAT2O75908 522 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CYP3A4P08684 503 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TNFRSF8P28908 595 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 GRIA3P42263 894 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 PRIM2P49643 509 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 TAF6P49848 677 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ARHGAP8P85298 464 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 ELAVL2Q12926 359 aaKnown RBP9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 RIPK1Q13546 671 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SPIDRQ14159 915 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 CARTPTQ16568 116 aa9.92□□□□□ -0.82
MSC-AS1-201ENST00000457356 SPDYE7PQ495Y7 208 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms