RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 FAM187BQ17R55 369 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 LRRC38Q5VT99 294 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CDHR3Q6ZTQ4 885 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CCDC80Q76M96 950 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 SNX27Q96L92 541 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 Q9H521 79 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 DHX35Q9H5Z1 703 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PIH1D1Q9NWS0 290 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 RRN3Q9NYV6 651 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 SLC45A1Q9Y2W3 748 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 TSC22D4Q9Y3Q8 395 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 E9PBE3 544 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 FBP2O00757 339 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ITGAVP06756 1048 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 PIM1P11309 404 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 SDC4P31431 198 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 CPOXP36551 454 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ZBTB46Q86UZ6 589 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 PPIL6Q8IXY8 311 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DEFB107AQ8IZN7 70 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 SRPK1Q96SB4 655 aaKnown RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 APBA2Q99767 749 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ZNF518BQ9C0D4 1074 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 AGO3Q9H9G7 860 aaKnown RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 CITO14578 2027 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 F8W810 466 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 COPEO14579 308 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 B3GAT3O94766 335 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ASGR1P07306 291 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ELK3P41970 407 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 CA9Q16790 459 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DCAF4L1Q3SXM0 396 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ITPRIPL1Q6GPH6 555 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 PDIK1LQ8N165 341 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 RSPH1Q8WYR4 309 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 FAF2Q96CS3 445 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 APOPT1Q96IL0 206 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 CCDC106Q9BWC9 280 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 FOXP3Q9BZS1 431 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 GPBP1L1Q9HC44 474 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
TOP3B-213ENST00000457179 DRG1Q9Y295 367 aaKnown RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 HBS1LQ9Y450 684 aaKnown RBP13.88□□□□□ -0.19
TOP3B-213ENST00000457179 NFKBIAP25963 317 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 HDAC4P56524 1084 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 RELAQ04206 551 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 BBS12Q6ZW61 710 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 BTBD9Q96Q07 612 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 XPNPEP3Q9NQH7 507 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 RSL24D1Q9UHA3 163 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CDH22Q9UJ99 828 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 UBQLN1Q9UMX0 589 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 SHOC2Q9UQ13 582 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 POMPQ9Y244 141 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 KCNN4O15554 427 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 BEST1O76090 585 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 INHBAP08476 426 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 GPD1P21695 349 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ATICP31939 592 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 MSX2P35548 267 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ETV4P43268 484 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CLCNKBP51801 687 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 MAP3K7CLP57077 242 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 TAP1Q03518 808 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CRLF3Q8IUI8 442 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ADGRF2Q8IZF7 708 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 MARVELD2Q8N4S9 558 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 E2F7Q96AV8 911 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CEPT1Q9Y6K0 416 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 SERPINB7O75635 380 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 TRUB2O95900 331 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 HMGCRP04035 888 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 GSTT2P0CG29 244 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms