RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 JMJD4Q9H9V9 463 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 FNIP2Q9P278 1114 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PADI4Q9UM07 663 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RAB19A4D1S5 217 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CA8P35219 290 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RTP1P59025 263 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CYP27A1Q02318 531 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ACOX1Q15067 660 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RABL3Q5HYI8 236 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SLC27A3Q5K4L6 730 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 IER5Q5VY09 327 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TMPRSS11AQ6ZMR5 421 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 DSG4Q86SJ6 1040 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RAB43Q86YS6 212 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NKAPQ8N5F7 415 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF607Q96SK3 696 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ELOVL6Q9H5J4 265 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RUVBL2Q9Y230 463 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 HEY1Q9Y5J3 304 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SLC30A1Q9Y6M5 507 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KIDINS220Q9ULH0 1771 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 F8W031 263 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KCNK1O00180 336 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ITGAXP20702 1163 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CBX5P45973 191 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM132DQ14C87 1099 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 BTBD8Q5XKL5 378 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LENG9Q96B70 501 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 FAM118BQ9BPY3 351 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SUGCTQ9HAC7 445 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 DAPK2Q9UIK4 370 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 DBR1Q9UK59 544 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RPS6KL1Q9Y6S9 549 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MAP2K7O14733 419 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CLOCKO15516 846 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SERPINA3P01011 423 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LYNP07948 512 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 YWHABP31946 246 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GRIA1P42261 906 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 HERC3Q15034 1050 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CIAPIN1Q6FI81 312 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 HIPK1Q86Z02 1210 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MB21D2Q8IYB1 491 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LXNQ9BS40 222 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 C1QTNF1Q9BXJ1 281 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CLPBQ9H078 707 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KBTBD4Q9NVX7 518 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MAP3K6O95382 1288 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ATP4AP20648 1035 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PRKCIP41743 596 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ZAP70P43403 619 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CDKAL1Q5VV42 579 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MAB21L3Q8N8X9 362 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MND1Q9BWT6 205 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CYP4F11Q9HBI6 524 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MIEF1Q9NQG6 463 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ADAMTS13Q76LX8 1427 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 IQSEC2Q5JU85 1478 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MGAT4DA6NG13 374 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NOS1APO75052 506 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RAPGEF3O95398 923 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TGM6O95932 706 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MYBL2P10244 700 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 STARP49675 285 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PSME3P61289 254 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 C17orf53Q8N3J3 647 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ENTPD7Q9NQZ7 604 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GNPTGQ9UJJ9 305 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LRFN2Q9ULH4 789 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PCDHGB7Q9Y5F8 929 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 RGSL1A5PLK6 1076 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PDLIM1O00151 329 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KCNA1Q09470 495 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 DGKKQ5KSL6 1271 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GALNT6Q8NCL4 622 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 EXOSC4Q9NPD3 245 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LEF1Q9UJU2 399 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 UMODL1Q5DID0 1318 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 H7C4K7 107 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 RGS14O43566 566 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FBXW4P57775 412 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 LSM12Q3MHD2 195 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FAM199XQ6PEV8 388 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TC2NQ8N9U0 490 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FEZF2Q8TBJ5 459 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 NARS2Q96I59 477 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 RTKNQ9BST9 563 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC6A16Q9GZN6 736 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 DENND2DQ9H6A0 471 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 NOL4O94818 638 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CYP2A7P20853 494 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FGFR3P22607 806 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 UGT1A5P35504 534 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TTPAP49638 278 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 POU5F1BQ06416 359 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM132BQ14DG7 1078 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms