RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 PCLAFQ15004 111 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 CCDC153Q494R4 210 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 WDR75Q8IWA0 830 aaKnown RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 LZTR1Q8N653 840 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 CFAP61Q8NHU2 1237 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PIWIL2Q8TC59 973 aaKnown RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 PRR11Q96HE9 360 aaPredicted RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 SOX13Q9UN79 622 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 NEU3Q9UQ49 428 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 GYG2O15488 501 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 CA12O43570 354 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 PEX11AO75192 247 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 JCHAINP01591 159 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 SERPINE1P05121 402 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 CSE1LP55060 971 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 CDH17Q12864 832 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 KCNA10Q16322 511 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 CCSAPQ6IQ19 270 aaPredicted RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 C4orf50Q6ZRC1 276 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 STRA8Q7Z7C7 330 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 TTC7BQ86TV6 843 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 ALYREFQ86V81 257 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 DCLK2Q8N568 766 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 ENDOVQ8N8Q3 282 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 MCMBPQ9BTE3 642 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 SNX15Q9NRS6 342 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 TAS2R1Q9NYW7 299 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 GABRQQ9UN88 632 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 AAR2Q9Y312 384 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 LMNAP02545 664 aaKnown RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 MPOP05164 745 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 SERPINA6P08185 405 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 HADHAP40939 763 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 SLC1A6P48664 564 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 CERCAMQ5T4B2 595 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 FSTL4Q6MZW2 842 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 ZCCHC23Q6ZST2 131 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 ANKRD27Q96NW4 1050 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 SMOC2Q9H3U7 446 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 FAM96AQ9H5X1 160 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 DENND2DQ9H6A0 471 aaPredicted RBP15.38■□□□□ 0.05
LDLR-202ENST00000455727 IL1RAPL1Q9NZN1 696 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 TMEM216Q9P0N5 145 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 COPG2Q9UBF2 871 aa15.38■□□□□ 0.05
LDLR-202ENST00000455727 FAM155AB1AL88 458 aaPredicted RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 TIMM44O43615 452 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 TM4SF4P48230 202 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 FLT3LGP49771 235 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 RPL10AP62906 217 aaKnown RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 IRX4P78413 519 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 PPP2R5DQ14738 602 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 PPM1JQ5JR12 505 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 MANEALQ5VSG8 457 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 TLDC1Q6P9B6 456 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CNTD1Q8N815 330 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 OR6Y1Q8NGX8 325 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 SCAMP5Q8TAC9 235 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 MFSD3Q96ES6 412 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 PPP1R2P1Q96PQ5 205 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 TMEM209Q96SK2 561 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 KIFC1Q9BW19 673 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CATSPERBQ9H7T0 1116 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 NSMCE4AQ9NXX6 385 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 PPARGC1AQ9UBK2 798 aaKnown RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 PCDHB8Q9UN66 801 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 KITP10721 976 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 GM2AP17900 193 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CCR1P32246 355 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CACNB2Q08289 660 aaPredicted RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 BTBD8Q5XKL5 378 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 RINLQ6ZS11 566 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 KCNMB4Q86W47 210 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 SPATA2LQ8IUW3 424 aaPredicted RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 ARHGAP12Q8IWW6 846 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
LDLR-202ENST00000455727 FCRL5Q96RD9 977 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 AGAP2Q99490 1192 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 IL12RB2Q99665 862 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■□□ 15.9
LDLR-202ENST00000455727 INPP5FQ9Y2H2 1132 aa15.37■□□□□ 0.05
LDLR-202ENST00000455727 CASP8AP2Q9UKL3 1982 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 ITM2AO43736 263 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 ATP9BO43861 1147 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 KCNA4P22459 653 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 SLC5A3P53794 718 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
LDLR-202ENST00000455727 HSP90AA5PQ58FG0 334 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 RWDD4Q6NW29 188 aaKnown RBP15.36■□□□□ 0.05
LDLR-202ENST00000455727 CLEC14AQ86T13 490 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 TMPRSS6Q8IU80 811 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 C10orf107Q8IVU9 208 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
LDLR-202ENST00000455727 HASPINQ8TF76 798 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms