RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NT5C3BQ969T7 300 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 FEM1AQ9BSK4 669 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 APOBEC2Q9Y235 224 aaKnown RBP16.52■□□□□ 0.24
GPC1-206ENST00000455111 NCKAP1Q9Y2A7 1128 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 ZFYVE26Q68DK2 2539 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 ATP9BO43861 1147 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 GOT1P17174 413 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 C5AR1P21730 350 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 CCR1P32246 355 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
GPC1-206ENST00000455111 CCR5P51681 352 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 UBE2HP62256 183 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 CDK17Q00537 523 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 NME3Q13232 169 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 SLC12A1Q13621 1099 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 TEAD4Q15561 434 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 C2CD6Q53TS8 623 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 AGBL4Q5VU57 503 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.51■□□□□ 0.23
GPC1-206ENST00000455111 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
GPC1-206ENST00000455111 BNIPLQ7Z465 357 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 OR14C36Q8NHC7 312 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 SAP25Q8TEE9 199 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 OMDQ99983 421 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 NAA15Q9BXJ9 866 aaKnown RBP16.51■□□□□ 0.23
GPC1-206ENST00000455111 ARHGEF38Q9NXL2 777 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 ZNF212Q9UDV6 495 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 PPM1HQ9ULR3 514 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 CA5BQ9Y2D0 317 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 TBC1D30Q9Y2I9 924 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 GPSM3Q9Y4H4 160 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
GPC1-206ENST00000455111 K7ERQ8 282 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 M0QYT0 321 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 SNAP91O60641 907 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 IL1BP01584 269 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 CXCR3P49682 368 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 NXPH1P58417 271 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 CNTN1Q12860 1018 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 BNIP3Q12983 259 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 ELAVL3Q14576 367 aaKnown RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 POM121L1PQ3SYA9 428 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 Q6ZVU0 165 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.234e-6■■■■■ 28
GPC1-206ENST00000455111 SH2D3CQ8N5H7 860 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 VOPP1Q96AW1 172 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 RPRD1AQ96P16 312 aaPredicted RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 ELF4Q99607 663 aaPredicted RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 TRIM62Q9BVG3 475 aa16.5■□□□□ 0.23
GPC1-206ENST00000455111 ARID1BQ8NFD5 2236 aaPredicted RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
GPC1-206ENST00000455111 FAM208BQ5VWN6 2430 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 SMAD6O43541 496 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 TNFSF14O43557 240 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 PLRG1O43660 514 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 RNASEH1O60930 286 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 MOCS3O95396 460 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 ADH1BP00325 375 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 SRCP12931 536 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 ABCB4P21439 1286 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 GLDCP23378 1020 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 CD38P28907 300 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 NOS2P35228 1153 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 GRK6P43250 576 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 MTIF2P46199 727 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 DNAJC3Q13217 504 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 DLG2Q15700 870 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 MAN2A1Q16706 1144 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 C19orf48Q6RUI8 117 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 DHRS13Q6UX07 377 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 TBCBQ99426 244 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 CDC6Q99741 560 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 ACE2Q9BYF1 805 aaPredicted RBP16.49■□□□□ 0.23
GPC1-206ENST00000455111 NDST4Q9H3R1 872 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 CLSTN2Q9H4D0 955 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 LHX6Q9UPM6 363 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
GPC1-206ENST00000455111 A0A0D9SEW6 157 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 CYP11B1P15538 503 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 EPHA8P29322 1005 aaPredicted RBP16.48■□□□□ 0.23
GPC1-206ENST00000455111 MAT2AP31153 395 aaKnown RBP16.48■□□□□ 0.23
GPC1-206ENST00000455111 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
GPC1-206ENST00000455111 FLT3P36888 993 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 GABRB2P47870 512 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 PTK2Q05397 1052 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 DRAP1Q14919 205 aaPredicted RBP16.48■□□□□ 0.23
GPC1-206ENST00000455111 VWA3BQ502W6 1294 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 RABGAP1LQ5R372 815 aa16.48■□□□□ 0.23
GPC1-206ENST00000455111 PIP5KL1Q5T9C9 394 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms