RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CCDC110Q8TBZ0 833 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ACMSDQ8TDX5 336 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ARL8AQ96BM9 186 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SIGLEC10Q96LC7 697 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SRPK1Q96SB4 655 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM118BQ9BPY3 351 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 HINFPQ9BQA5 517 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 LBHD1Q9BQE6 289 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ZBED2Q9BTP6 218 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 PRKD2Q9BZL6 878 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC25A51Q9H1U9 297 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ANLNQ9NQW6 1124 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 MKS1Q9NXB0 559 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 RABGEF1Q9UJ41 708 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 LSM7Q9UK45 103 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 PCDHA11Q9Y5I1 949 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 IKBKGQ9Y6K9 419 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SYNJ2BP-COX16A0A087WUM0 186 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM237BA0A1B0GVD1 139 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 A0A1B0GVM2 712 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 TCAF2A6NFQ2 919 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 NT5C1B-RDH14C9J2C7 533 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ACSL3O95573 720 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 LRG1P02750 347 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 F11P03951 625 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 POLBP06746 335 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 TACR2P21452 398 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 GBP2P32456 591 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 CDH17Q12864 832 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC12A1Q13621 1099 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 RNF43Q68DV7 783 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 CCDC91Q7Z6B0 441 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 LMNTD2Q8IXW0 634 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 MRPL43Q8N983 215 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 FBXO36Q8NEA4 188 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC44A1Q8WWI5 657 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 MRPS31Q92665 395 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 USP13Q92995 863 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 STAMBPL1Q96FJ0 436 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 RANBP9Q96S59 729 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 LGMNQ99538 433 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 NACA2Q9H009 215 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 VPS37BQ9H9H4 285 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 GLOD4Q9HC38 313 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ZDHHC7Q9NXF8 308 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 COX16Q9P0S2 106 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF212Q9UDV6 495 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ZC3H7BQ9UGR2 993 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 RSPH14Q9UHP6 348 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 TBC1D30Q9Y2I9 924 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC27A5Q9Y2P5 690 aa6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 ARIH1Q9Y4X5 557 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-210ENST00000454859 NYNRINQ9P2P1 1898 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MYO18AQ92614 2054 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MIA3Q5JRA6 1907 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 POLR3GO15318 223 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 RAMP2O60895 175 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 KRT37O76014 449 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 KRT38O76015 456 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 USP1O94782 785 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 PAPSS2O95340 614 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SEC24AO95486 1093 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 METTL18O95568 372 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 CXCL14O95715 111 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 GLUD1P00367 558 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ITGB8P26012 769 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ELK3P41970 407 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MSH2P43246 934 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MAGOHP61326 146 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SERINC3Q13530 473 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 BBS9Q3SYG4 887 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 FNBP1LQ5T0N5 605 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ANKRD22Q5VYY1 191 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 FBXL22Q6P050 247 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 LEKR1Q6ZMV7 388 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TIFABQ6ZNK6 161 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 HTR3DQ70Z44 454 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 C16orf59Q7L2K0 433 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 GALNT7Q86SF2 657 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC26A11Q86WA9 606 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 LRRC6Q86X45 466 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 NPWQ8N729 165 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 HJURPQ8NCD3 748 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TADA1Q96BN2 335 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 OTUB2Q96DC9 234 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 KLHL5Q96PQ7 755 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MCOLN1Q9GZU1 580 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SIK2Q9H0K1 926 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MOCS1Q9NZB8 636 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SAMD15Q9P1V8 674 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 IPO11Q9UI26 975 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 NOVA2Q9UNW9 492 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 KIAA0100Q14667 2235 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TRAV19A0A0A6YYK7 116 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM159BA6NKW6 160 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 RASA4BC9J798 803 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms