RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 CLDN11O75508 207 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 S1PR4O95977 384 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 DNTTP04053 509 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 CFIP05156 583 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 CALB1P05937 261 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 SRPRAP08240 638 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 CCDC172P0C7W6 258 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 KRT3P12035 628 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 PTMSP20962 102 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 TNFAIP3P21580 790 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 MAOBP27338 520 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 SDC4P31431 198 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 RFC1P35251 1148 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 CDH4P55283 916 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 TPM4P67936 248 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 SLC12A1Q13621 1099 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ASIC2Q16515 512 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 HNRNPA1L2Q32P51 320 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ALFQ53S48 1182 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 IL31Q6EBC2 164 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 LRRC31Q6UY01 552 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ARCQ7LC44 396 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ERMP1Q7Z2K6 904 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 BNIPLQ7Z465 357 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 TFAP2DQ7Z6R9 452 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 PHF13Q86YI8 300 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 ZNF683Q8IZ20 524 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 NUP58Q9BVL2 599 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 NUSAP1Q9BXS6 441 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 MPP6Q9NZW5 540 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 DCHS1Q96JQ0 3298 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 CEP250Q9BV73 2442 aa9.73□□□□□ -0.85
CDC42EP3-203ENST00000453555 PCDH15Q96QU1 1955 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 EDDM13A0A1B0GTR0 161 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 A0A1W2PQC6 194 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 C2CD4BA6NLJ0 364 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DRGXA6NNA5 263 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 C4orf47A7E2U8 309 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 GOLGA6L19H0YKK7 550 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ENDOD1O94919 500 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 RHOCP08134 193 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 VAV1P15498 845 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 GPD1P21695 349 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 OXTRP30559 389 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ACSL1P33121 698 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 NNMTP40261 264 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MAPK8P45983 427 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 PLK1P53350 603 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 OXCT1P55809 520 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 FANCCQ00597 558 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 NR1I3Q14994 352 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DUOXA1Q1HG43 343 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 C5orf22Q49AR2 442 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 C9orf64Q5T6V5 341 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 SFMBT2Q5VUG0 894 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ZNF776Q68DI1 518 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ACAD10Q6JQN1 1059 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 WDR59Q6PJI9 974 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MON1BQ7L1V2 547 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MMAAQ8IVH4 418 aaKnown RBP9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 STK40Q8N2I9 435 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 GANCQ8TET4 914 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 FAM172AQ8WUF8 416 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 PTPRN2Q92932 1015 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ALG14Q96F25 216 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ZNF419Q96HQ0 510 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 C1orf74Q96LT6 269 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 FEM1AQ9BSK4 669 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MAGEB5Q9BZ81 275 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MUC3BQ9H195 1237 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MIR1-1HGQ9H1L0 117 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 RSPH9Q9H1X1 276 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 HAUS4Q9H6D7 363 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 FBRSQ9HAH7 460 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 TAS2R14Q9NYV8 317 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 SLC25A13Q9UJS0 675 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 VPS28Q9UK41 221 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 MYO6Q9UM54 1294 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 ITIH6Q6UXX5 1313 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 CHD5Q8TDI0 1954 aa9.72□□□□□ -0.85
CDC42EP3-203ENST00000453555 DOCK9Q9BZ29 2069 aa9.71□□□□□ -0.85
CDC42EP3-203ENST00000453555 LAMA1P25391 3075 aa9.71□□□□□ -0.85
CDC42EP3-203ENST00000453555 MED19A0JLT2 244 aaPredicted RBP9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 SIGLEC16A6NMB1 481 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 CDX4O14627 284 aaPredicted RBP9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 LCE2BO14633 110 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 MID1O15344 667 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 CCP110O43303 1012 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 BNIP3LO60238 219 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 RNASEH1O60930 286 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 ADH1BP00325 375 aa9.71□□□□□ -0.86
CDC42EP3-203ENST00000453555 IGLV3-19P01714 112 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms