RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 CFHR3Q02985 330 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 SEMA5AQ13591 1074 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 LAMB3Q13751 1172 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 VGLL4Q14135 290 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 ZNF268Q14587 947 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 GFOD2Q3B7J2 385 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 PLAG1Q6DJT9 500 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 TTLL5Q6EMB2 1281 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 USP49Q70CQ1 688 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 METTL25Q8N6Q8 603 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 SMCR8Q8TEV9 937 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 PRMT6Q96LA8 375 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 GOLGA6AQ9NYA3 693 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 C9orf78Q9NZ63 289 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 THEGQ9P2T0 379 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 NKX1-2Q9UD57 310 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 PCDHAC2Q9Y5I4 1007 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 FRMPD2Q68DX3 1309 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 FAM186AA6NE01 2351 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 OTOFQ9HC10 1997 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 COL1A1P02452 1464 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 CLRN2A0PK11 232 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 GRM8O00222 908 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 BMP15O95972 392 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 RHCEP18577 417 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 CARSP49589 748 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 FKBP1AP62942 108 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 HTRA4P83105 476 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 RHDQ02161 417 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 MAPK7Q13164 816 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 TNFAIP1Q13829 316 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 LRRC26Q2I0M4 334 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 C9orf50Q5SZB4 431 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 MZT2AQ6P582 158 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 TMEM65Q6PI78 240 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 LDHAL6AQ6ZMR3 332 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 C15orf52Q6ZUT6 534 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 UNC13DQ70J99 1090 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 ERO1BQ86YB8 467 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 LIX1LQ8IVB5 337 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 PNPLA1Q8N8W4 532 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 PRSS3P2Q8NHM4 247 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 IPCEF1Q8WWN9 437 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 ZBTB9Q96C00 473 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 EDC3Q96F86 508 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 SELENOOQ9BVL4 669 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 OBP2AQ9NY56 170 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 DNAJB11Q9UBS4 358 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 G3BP2Q9UN86 482 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 PFASO15067 1338 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 COL4A1P02462 1669 aa4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 DDX60LQ5H9U9 1706 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-207ENST00000451088 CDH23Q9H251 3354 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ECM29Q5VYK3 1845 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ZNF318Q5VUA4 2279 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 PDHXO00330 501 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 KCNAB3O43448 404 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 MT-ND5P03915 603 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 CHRNDQ07001 517 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 STK3Q13188 491 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 UBE4AQ14139 1066 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 CLCA4Q14CN2 919 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 RABEP1Q15276 862 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 SEC23BQ15437 767 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ST3GAL2Q16842 350 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 AWAT1Q58HT5 328 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 BEND3Q5T5X7 828 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 PXDC1Q5TGL8 231 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 MANEALQ5VSG8 457 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 RANBP10Q6VN20 620 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 DCDC5Q6ZRR9 648 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 G2E3Q7L622 706 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ANKRD23Q86SG2 305 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 C12orf76Q8N812 135 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 TTC8Q8TAM2 541 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 OSR1Q8TAX0 266 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 MAP4K1Q92918 833 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 STRBPQ96SI9 672 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ZCWPW1Q9H0M4 648 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 WDR26Q9H7D7 661 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 VEZTQ9HBM0 779 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 CD209Q9NNX6 404 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 STEAP1Q9UHE8 339 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 ITGB1BP2Q9UKP3 347 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 AFG3L2Q9Y4W6 797 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 PTPRCP08575 1304 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 MROH5Q6ZUA9 1318 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 EPG5Q9HCE0 2579 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 PLXNA1Q9UIW2 1896 aa4.88□□□□□ -1.63
GTF3C3-207ENST00000451088 AK9Q5TCS8 1911 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 CACNA1HO95180 2353 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 ATRXP46100 2492 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 F8W8V4 182 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms