RNA–Protein interactions for RNA: ENST00000450288.3

PDXDC1-203, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-203ENST00000450288 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 ZNF446Q9NWS9 450 aa8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 ARHGEF38Q9NXL2 777 aa8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 NCOR1O75376 2440 aa8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 SCN1AP35498 2009 aa8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 ZDBF2Q9HCK1 2354 aa8.33□□□□□ -1.08
PDXDC1-203ENST00000450288 SDR42E2A6NKP2 422 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SNAP91O60641 907 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PCDH8O95206 1070 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ACVRL1P37023 503 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 DSC2Q02487 901 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SETDB1Q15047 1291 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FNDC3BQ53EP0 1204 aaKnown RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TAF1BQ53T94 588 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SYDE1Q6ZW31 735 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FAM124AQ86V42 546 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 LRRC6Q86X45 466 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ALLCQ8N6M5 410 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 NAT14Q8WUY8 206 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PRMT1Q99873 361 aaKnown RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SLC39A8Q9C0K1 460 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 NINJ2Q9NZG7 142 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FBXW11Q9UKB1 542 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 H3BQ06 376 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TGM5O43548 720 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CDH16O75309 829 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PFKMP08237 780 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ITGB8P26012 769 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PTPN9P43378 593 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 EFTUD2Q15029 972 aaKnown RBP eCLIP8.32□□□□□ -1.087e-7■■■■□ 23
PDXDC1-203ENST00000450288 ATXN7L2Q5T6C5 722 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 WDR93Q6P2C0 686 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ANKS1BQ7Z6G8 1248 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CHPFQ8IZ52 775 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PDZD8Q8NEN9 1154 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 EGFL8Q99944 293 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ACSS2Q9NR19 701 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TMEM120BA0PK00 339 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ACSL4O60488 711 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 IL1BP01584 269 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PSEN1P49768 467 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PPP2R2AP63151 447 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 KBTBD12Q3ZCT8 623 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ALFQ53S48 1182 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 C9orf50Q5SZB4 431 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SERPINA13PQ6UXR4 307 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PAQR9Q6ZVX9 377 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 MICALCLQ6ZW33 695 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 RD3Q7Z3Z2 195 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 STRA8Q7Z7C7 330 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TTC7BQ86TV6 843 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SNX19Q92543 992 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FUBP3Q96I24 572 aaKnown RBP eCLIP8.32□□□□□ -1.083e-8■□□□□ 9.4
PDXDC1-203ENST00000450288 SPATA13Q96N96 652 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PAFAH2Q99487 392 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 LRRC19Q9H756 370 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 VRTNQ9H8Y1 702 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CYP4F12Q9HCS2 524 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 KCND1Q9NSA2 647 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TMEM30AQ9NV96 361 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 EVLQ9UI08 416 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SLC25A13Q9UJS0 675 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TCRBV7S3A2A0A539 114 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 HMGB1P1B2RPK0 211 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 J3KR12 359 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 GRM6O15303 877 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TTC4O95801 387 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 HAPLN1P10915 354 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CHN1P15882 459 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 PTPN2P17706 415 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ALDH3A1P30838 453 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 GEMP55040 296 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ERVFC1P60507 584 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 GRM2Q14416 872 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 KRT33BQ14525 404 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 MORF4L2Q15014 288 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TIGD7Q6NT04 549 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ZNF662Q6ZS27 426 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 SPRED2Q7Z698 418 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FNIP1Q8TF40 1166 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 TASP1Q9H6P5 420 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 BRD9Q9H8M2 597 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 GTSE1Q9NYZ3 720 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 WHRNQ9P202 907 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 CRLS1Q9UJA2 301 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 FZD10Q9ULW2 581 aa8.32□□□□□ -1.08
PDXDC1-203ENST00000450288 STK38LQ9Y2H1 464 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms