RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 METAP1P53582 386 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 OXCT1P55809 520 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CDR2Q01850 454 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 DEUP1Q05D60 604 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 FOXC1Q12948 553 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 C1orf74Q96LT6 269 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 PCDHB18PQ96TA0 734 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 FZD4Q9ULV1 537 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 FNDC3AQ9Y2H6 1198 aaKnown RBP12.71□□□□□ -0.37
MSH5-209ENST00000450148 DAAM1Q9Y4D1 1078 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CACNA1BQ00975 2339 aa12.71□□□□□ -0.38
MSH5-209ENST00000450148 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 GOLGA8SH3BPF8 625 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 RNASEH1O60930 286 aaKnown RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 CBFA2T3O75081 653 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 FSBPO95073 299 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 SPINK2P20155 84 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 C5AR1P21730 350 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 GRIA4P48058 902 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 PSMD8P48556 350 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 MYL5Q02045 173 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 ELAVL3Q14576 367 aaKnown RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 SYCP1Q15431 976 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 STX1AQ16623 288 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 KIF19Q2TAC6 998 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 HLA-BQ31612 363 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 RNF219Q5W0B1 726 aaPredicted RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 SH2D3CQ8N5H7 860 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 EMC1Q8N766 993 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 SNX19Q92543 992 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 GAREM1Q9H706 876 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
MSH5-209ENST00000450148 TMEM63CQ9P1W3 806 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 NCKAP1Q9Y2A7 1128 aa12.7□□□□□ -0.38
MSH5-209ENST00000450148 A0A0D9SEW6 157 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 A0A1W2PPC4 97 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SNAP91O60641 907 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 RNASEH2AO75792 299 aaKnown RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 CER1O95813 267 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 ADH1BP00325 375 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 MT-CO1P00395 513 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SRCP12931 536 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 GOT1P17174 413 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 NNMTP40261 264 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 AFF3P51826 1226 aaKnown RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 ADPRHP54922 357 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 DLG2Q15700 870 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 NAXDQ8IW45 347 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 OR2T34Q8NGX1 318 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 JOSD2Q8TAC2 188 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SLC30A5Q8TAD4 765 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 BAHD1Q8TBE0 780 aaPredicted RBP12.69□□□□□ -0.38
MSH5-209ENST00000450148 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 HAPLN3Q96S86 360 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 TM7SF3Q9NS93 570 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 TMEM51Q9NW97 253 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 MPP6Q9NZW5 540 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
MSH5-209ENST00000450148 KMT2BQ9UMN6 2715 aaPredicted RBP12.68□□□□□ -0.38
MSH5-209ENST00000450148 CHD8Q9HCK8 2581 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 TCRBV5S1A1TA0A578 114 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 FAM47DPA6NHR8 397 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 C2CD4BA6NLJ0 364 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 E9PAM4 449 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 PLK4O00444 970 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 WNT9AO14904 365 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 MCF2LO15068 1137 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 GJB6O95452 261 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 IL1BP01584 269 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 WNT1P04628 370 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 ATP1A3P13637 1013 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 RDXP35241 583 aaKnown RBP12.68□□□□□ -0.38
MSH5-209ENST00000450148 STAT1P42224 750 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 CTSKP43235 329 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 CCR5P51681 352 aa12.68□□□□□ -0.38
MSH5-209ENST00000450148 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
MSH5-209ENST00000450148 C15orf59Q2T9L4 293 aaPredicted RBP12.68□□□□□ -0.38
MSH5-209ENST00000450148 CCDC14Q49A88 953 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms