RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 MAPKAPK2P49137 400 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 GNA12Q03113 381 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 SEMA3BQ13214 749 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 CAMK2GQ13555 558 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 ACCSLQ4AC99 568 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 BOLA3Q53S33 107 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 PPP6R3Q5H9R7 873 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 KCNT1Q5JUK3 1230 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 CYP4V2Q6ZWL3 525 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 CACUL1Q86Y37 369 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 TMPRSS6Q8IU80 811 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 NIPA2Q8N8Q9 360 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 KDM1BQ8NB78 822 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 SLC35G2Q8TBE7 412 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 HSPH1Q92598 858 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 SIPA1Q96FS4 1042 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 MRGPRX1Q96LB2 322 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 KCTD15Q96SI1 283 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 PSMB7Q99436 277 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 MKRN2Q9H000 416 aaKnown RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 RETREG1Q9H6L5 497 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 PRDM16Q9HAZ2 1276 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 ATP13A1Q9HD20 1204 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 OSGEPQ9NPF4 335 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 PRSS16Q9NQE7 514 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 VPS51Q9UID3 782 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 SMG5Q9UPR3 1016 aaKnown RBP16.11■□□□□ 0.17
TOP3B-211ENST00000449704 NEU3Q9UQ49 428 aa16.11■□□□□ 0.17
TOP3B-211ENST00000449704 PRR23AA6NEV1 266 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 SOWAHDA6NJG2 315 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 CBX4O00257 560 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 EEF2KO00418 725 aaKnown RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 DAPK3O43293 454 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 PROSCO94903 275 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 GLDCP23378 1020 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 IL1R2P27930 398 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 ACVRL1P37023 503 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 BYSLQ13895 437 aaKnown RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 SPA17Q15506 151 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 HNRNPA1L2Q32P51 320 aaKnown RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 IL31Q6EBC2 164 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 LINGO4Q6UY18 593 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 KBTBD6Q86V97 674 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 PSTKQ8IV42 348 aaKnown RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 RTL3Q8N8U3 475 aaKnown RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 DCAF4L2Q8NA75 395 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 SUMF1Q8NBK3 374 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 PRCCQ92733 491 aaPredicted RBP16.1■□□□□ 0.17
TOP3B-211ENST00000449704 SPACA7Q96KW9 195 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 IMPACTQ9P2X3 320 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 INTUQ9ULD6 942 aa16.1■□□□□ 0.17
TOP3B-211ENST00000449704 PIEZO1Q92508 2521 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 EDDM13A0A1B0GTR0 161 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 GOLGA6L6A8MZA4 724 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 EIF3CLB5ME19 914 aaKnown RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 MAP3K13O43283 966 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 GFRA3O60609 400 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 RAMP2O60895 175 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 SIN3BO75182 1162 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 MT-CO1P00395 513 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 RARAP10276 462 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 HTR7P34969 479 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 GJC1P36383 396 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 ETFBP38117 255 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 P2RY2P41231 377 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 COPAP53621 1224 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 MESDQ14696 234 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 HADHQ16836 314 aaKnown RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 C9orf64Q5T6V5 341 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 RHOT2Q8IXI1 618 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 FAM160A2Q8N612 972 aaPredicted RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 FRMD1Q8N878 549 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 ATP11CQ8NB49 1132 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 RFFLQ8WZ73 363 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 EIF3CQ99613 913 aaKnown RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 HINFPQ9BQA5 517 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 MAGEH1Q9H213 219 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 LCMT1Q9UIC8 334 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 CYP8B1Q9UNU6 501 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
TOP3B-211ENST00000449704 EPN1Q9Y6I3 576 aaPredicted RBP16.09■□□□□ 0.17
TOP3B-211ENST00000449704 TARSL2A2RTX5 802 aaKnown RBP16.08■□□□□ 0.16
TOP3B-211ENST00000449704 BNIP3LO60238 219 aa16.08■□□□□ 0.16
TOP3B-211ENST00000449704 ZNF217O75362 1048 aa16.08■□□□□ 0.16
TOP3B-211ENST00000449704 IPO7O95373 1038 aaKnown RBP16.08■□□□□ 0.16
TOP3B-211ENST00000449704 ACADMP11310 421 aa16.08■□□□□ 0.16
TOP3B-211ENST00000449704 VAV1P15498 845 aa16.08■□□□□ 0.16
TOP3B-211ENST00000449704 GOT1P17174 413 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms