RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ZFP37Q9Y6Q3 630 aaPredicted RBP13.05□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 PRR23AA6NEV1 266 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TCAF2A6NFQ2 919 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 GFRA2O00451 464 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NCAM2O15394 837 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 KCNN4O15554 427 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 KRT14P02533 472 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 VAV1P15498 845 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 MX2P20592 715 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RBL1P28749 1068 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 GARSP41250 739 aaKnown RBP13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CDH4P55283 916 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 PPIDQ08752 370 aaKnown RBP13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 DUPD1Q68J44 220 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 HEATR6Q6AI08 1181 aaKnown RBP13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TP53INP2Q8IXH6 220 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 UMODL1-AS1Q8N2C9 162 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CPXM2Q8N436 756 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 FAM71DQ8N9W8 422 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CCHCR1Q8TD31 782 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 SEC14L1Q92503 715 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RTP4Q96DX8 246 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TRIM31Q9BZY9 425 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 DPH5Q9H2P9 285 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CLEC1BQ9P126 229 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RAB21Q9UL25 225 aa13.04□□□□□ -0.32
HLA-DRB9-201ENST00000449413 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 H0Y858 1186 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 DFFAO00273 331 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TRDMT1O14717 391 aaKnown RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TSPAN3O60637 253 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CLDN11O75508 207 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 IFNB1P01574 187 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TUBBP07437 444 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 WEE1P30291 646 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NBL1P41271 181 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RPL21P46778 160 aaKnown RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ID4P47928 161 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NDST2P52849 883 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 RPS24P62847 133 aaKnown RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 AP1B1Q10567 949 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 POTEHQ6S545 545 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 IFT20Q8IY31 132 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 GSPT2Q8IYD1 628 aaKnown RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 CFAP52Q8N1V2 620 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 GLIS1Q8NBF1 620 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 LGMNQ99538 433 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 PARD6BQ9BYG5 372 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 BRD8Q9H0E9 1235 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 ADAM7Q9H2U9 754 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NOL6Q9H6R4 1146 aaKnown RBP13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 FAM114A2Q9NRY5 505 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 NUP205Q92621 2012 aa13.03□□□□□ -0.32
HLA-DRB9-201ENST00000449413 TPRP12270 2363 aaKnown RBP13.02□□□□□ -0.32
HLA-DRB9-201ENST00000449413 DYNC1I1O14576 645 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RAMP2O60895 175 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ETS1P14921 441 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CHKAP35790 457 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 VPS41P49754 854 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ZNF33AQ06730 810 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CUL1Q13616 776 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 P3H1Q32P28 736 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 PARP15Q460N3 678 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CES5AQ6NT32 575 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ARID3BQ8IVW6 561 aaPredicted RBP13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CCNYQ8ND76 341 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 DEPDC1BQ8WUY9 529 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 HTR3CQ8WXA8 447 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FGF13Q92913 245 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 HMCESQ96FZ2 354 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SNF8Q96H20 258 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms