RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 TRIM59Q8IWR1 403 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 RPRD1AQ96P16 312 aaPredicted RBP13.69□□□□□ -0.22
HMGB3-204ENST00000448905 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 NRSN2Q9GZP1 204 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 TMEM51Q9NW97 253 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
HMGB3-204ENST00000448905 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 ZFYVE26Q68DK2 2539 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 ATRXP46100 2492 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 PTPRBP23467 1997 aa13.69□□□□□ -0.22
HMGB3-204ENST00000448905 SYNJ2BP-COX16A0A087WUM0 186 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 MCF2LO15068 1137 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 ALOX15BO15296 676 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 CLDN11O75508 207 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
HMGB3-204ENST00000448905 EPHA8P29322 1005 aaPredicted RBP13.68□□□□□ -0.22
HMGB3-204ENST00000448905 STK19P49842 368 aaPredicted RBP13.68□□□□□ -0.22
HMGB3-204ENST00000448905 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
HMGB3-204ENST00000448905 KRT83P78385 493 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 E2F1Q01094 437 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 SEMG2Q02383 582 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 BNIP3Q12983 259 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 SHBQ15464 509 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 DLG2Q15700 870 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
HMGB3-204ENST00000448905 SMYD5Q6GMV2 418 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 FBXL22Q6P050 247 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 BAP1Q92560 729 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 KLHDC7BQ96G42 594 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 KREMEN1Q96MU8 473 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 DYRK4Q9NR20 520 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 ASNSD1Q9NWL6 643 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 COX16Q9P0S2 106 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 CYTH4Q9UIA0 394 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 PPM1HQ9ULR3 514 aa13.68□□□□□ -0.22
HMGB3-204ENST00000448905 FREM2Q5SZK8 3169 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 WNT9AO14904 365 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PLRG1O43660 514 aaKnown RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 ATP9BO43861 1147 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 HSF2BPO75031 334 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 RTN2O75298 545 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 IGLV3-25P01717 112 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 MAT2AP31153 395 aaKnown RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 KRT9P35527 623 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PTK2Q05397 1052 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PAK1Q13153 545 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 NME3Q13232 169 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PDCLQ13371 301 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 AUHQ13825 339 aaKnown RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 ACBD5Q5T8D3 534 aaPredicted RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 NEK5Q6P3R8 708 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 DEFB106AQ8N104 65 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 TSC1Q92574 1164 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
HMGB3-204ENST00000448905 SYNCQ9H7C4 482 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PREBQ9HCU5 417 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 RRN3Q9NYV6 651 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PAXBP1Q9Y5B6 917 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 PKD1L2Q7Z442 2459 aa13.67□□□□□ -0.22
HMGB3-204ENST00000448905 BNIP3LO60238 219 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 DRD3P35462 400 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
HMGB3-204ENST00000448905 ACADVLP49748 655 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 STX17P56962 302 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
HMGB3-204ENST00000448905 EIF4EBP2Q13542 120 aaPredicted RBP13.66□□□□□ -0.22
HMGB3-204ENST00000448905 MORC3Q14149 939 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 RTP5Q14D33 572 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 TAF5Q15542 800 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 HES3Q5TGS1 186 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 OR6B2Q6IFH4 312 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 LRRC31Q6UY01 552 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 GBP6Q6ZN66 633 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 ATP11CQ8NB49 1132 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 FGF11Q92914 225 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 SLC2A13Q96QE2 648 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 UBL7Q96S82 380 aaPredicted RBP13.66□□□□□ -0.22
HMGB3-204ENST00000448905 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
HMGB3-204ENST00000448905 MUC3BQ9H195 1237 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 CTNND2Q9UQB3 1225 aa13.66□□□□□ -0.22
HMGB3-204ENST00000448905 C10orf142B7Z368 130 aa13.65□□□□□ -0.22
HMGB3-204ENST00000448905 CBX4O00257 560 aa13.65□□□□□ -0.22
HMGB3-204ENST00000448905 BIN1O00499 593 aa13.65□□□□□ -0.22
HMGB3-204ENST00000448905 F9P00740 461 aa13.65□□□□□ -0.22
HMGB3-204ENST00000448905 VAV1P15498 845 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms