RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 ENPP2Q13822 863 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 SIM2Q14190 667 aaPredicted RBP13.71□□□□□ -0.21
SNHG4-201ENST00000448190 ACAP1Q15027 740 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 BOLA3Q53S33 107 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 KIAA1324Q6UXG2 1013 aaKnown RBP13.71□□□□□ -0.21
SNHG4-201ENST00000448190 CEP68Q76N32 757 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
SNHG4-201ENST00000448190 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 DEFB119Q8N690 84 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 BAG1Q99933 345 aaPredicted RBP13.71□□□□□ -0.21
SNHG4-201ENST00000448190 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.21
SNHG4-201ENST00000448190 CD248Q9HCU0 757 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 PRSS16Q9NQE7 514 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 NEU3Q9UQ49 428 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.21
SNHG4-201ENST00000448190 KMT2EQ8IZD2 1858 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ZFHX2Q9C0A1 2572 aaPredicted RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 RCCD1A6NED2 376 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 NPC1O15118 1278 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 BNIP3LO60238 219 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 LILRB5O75023 590 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 NDUFA10O95299 355 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 TNNT1P13805 278 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 AIF1P55008 147 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 GNA12Q03113 381 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 SEMA3BQ13214 749 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ZC3H14Q6PJT7 736 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 RASSF3Q86WH2 238 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ACRBPQ8NEB7 543 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 CELF6Q96J87 481 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 MRGPRX1Q96LB2 322 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ATP13A1Q9HD20 1204 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 CWC15Q9P013 229 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 SUN2Q9UH99 717 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 VPS51Q9UID3 782 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 REXO2Q9Y3B8 237 aaKnown RBP13.7□□□□□ -0.22
SNHG4-201ENST00000448190 MFHAS1Q9Y4C4 1052 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 ATG2BQ96BY7 2078 aa13.7□□□□□ -0.22
SNHG4-201ENST00000448190 SMAD6O43541 496 aaKnown RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SIN3BO75182 1162 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 LCA5LO95447 670 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SRPRAP08240 638 aaKnown RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 CD48P09326 243 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 FECHP22830 423 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 AMPD1P23109 780 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 NNMTP40261 264 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 COPAP53621 1224 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 KRT83P78385 493 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SULT2A1Q06520 285 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 POLD3Q15054 466 aaPredicted RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 DLG2Q15700 870 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 C9orf64Q5T6V5 341 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 ASCL5Q7RTU5 278 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 TMEM139Q8IV31 216 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 STK40Q8N2I9 435 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 ATP11CQ8NB49 1132 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 GAB3Q8WWW8 586 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 ARHGEF2Q92974 986 aaKnown RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 NKD2Q969F2 451 aaPredicted RBP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SIPA1Q96FS4 1042 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 NCAPGQ9BPX3 1015 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNHG4-201ENST00000448190 SLC25A13Q9UJS0 675 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 INTUQ9ULD6 942 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 CYP8B1Q9UNU6 501 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 DUSP10Q9Y6W6 482 aa13.69□□□□□ -0.22
SNHG4-201ENST00000448190 CACNA1HO95180 2353 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 A0A0U1RQJ8 604 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 MAP3K13O43283 966 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 RAMP2O60895 175 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 ZMPSTE24O75844 475 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 ERCC2P18074 760 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 BCKDHBP21953 392 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 MAPKAPK2P49137 400 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 DNA2P51530 1060 aa13.68□□□□□ -0.22
SNHG4-201ENST00000448190 CAMK2GQ13555 558 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms