RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CCL15-CCL14A0A0B4J2E2 113 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TCRBV5S4A2TA0A5A2 114 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 RGS14O43566 566 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STAU1O95793 577 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CETPP11597 493 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 COX4I1P13073 169 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PIK3CGP48736 1102 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TGM3Q08188 693 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CCL15Q16663 113 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CTXN3Q4LDR2 81 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FGD3Q5JSP0 725 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 BROXQ5VW32 411 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 DUPD1Q68J44 220 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STYK1Q6J9G0 422 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 RETSATQ6NUM9 610 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ADGRA1Q86SQ6 560 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 DEFB106AQ8N104 65 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PRELID2Q8N945 189 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CYP2W1Q8TAV3 490 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PTCD3Q96EY7 689 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PRMT6Q96LA8 375 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TBL1YQ9BQ87 522 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 DDX43Q9NXZ2 648 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SLC25A13Q9UJS0 675 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 INVSQ9Y283 1065 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 KIDINS220Q9ULH0 1771 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FAM86B1E9PN63 330 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 BTN3A1O00481 513 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FYNP06241 537 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TSPAN19P0C672 248 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 HPGDP15428 266 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 VCLP18206 1134 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GRIA3P42263 894 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GUCA1AP43080 201 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 BACE1P56817 501 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PSME3P61289 254 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STX4Q12846 297 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STARD3Q14849 445 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PAN2Q504Q3 1202 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 NEPROQ6NW34 567 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 AADACL2Q6P093 401 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 MACC1Q6ZN28 852 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 KIAA0408Q6ZU52 694 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 MAP4K3Q8IVH8 894 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 UCMAQ8WVF2 138 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STARD8Q92502 1023 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ART4Q93070 314 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 NACC2Q96BF6 587 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GLT1D1Q96MS3 346 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ENTPD7Q9NQZ7 604 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SCAF8Q9UPN6 1271 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GAKO14976 1311 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 A0A0U1RQJ8 604 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 RGSL1A5PLK6 1076 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 H3BMM5 538 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 C2CD2LO14523 706 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 GJB6O95452 261 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 PBLDP30039 288 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ADSSP30520 456 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 THPOP40225 353 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 FAM187BQ17R55 369 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ABRAXAS1Q6UWZ7 409 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 NIPA1Q7RTP0 329 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 KCNK18Q7Z418 384 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 UXS1Q8NBZ7 420 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ACMSDQ8TDX5 336 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 BAP1Q92560 729 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 HGH1Q9BTY7 390 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 IL22Q9GZX6 179 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 STN1Q9H668 368 aaKnown RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ARMC7Q9H6L4 198 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 IL17RBQ9NRM6 502 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 MRPL39Q9NYK5 338 aaKnown RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 IPPQ9Y573 584 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 SNX8Q9Y5X2 465 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 DYTNA2CJ06 578 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 TRIM38O00635 465 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 LIASO43766 372 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 USP12O75317 370 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 SNRPB2P08579 225 aaKnown RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 CNPP09543 421 aaKnown RBP7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ERVK-10P10266 1014 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 NOS3P29474 1203 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ALDH9A1P49189 494 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 GPR15P49685 360 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 TUBP50607 506 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 SLC12A3P55017 1021 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 PRKCQQ04759 706 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 AAGABQ6PD74 315 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 IKBIPQ70UQ0 350 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 MCOLN3Q8TDD5 553 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ANKRD49Q8WVL7 239 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 TBCDQ9BTW9 1192 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 SYNDIG1Q9H7V2 258 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 POLR1BQ9H9Y6 1135 aa7.9□□□□□ -1.14
NEDD9-204ENST00000448183 KLHL1Q9NR64 748 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms