RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PSMD8P48556 350 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 RARRES1P49788 294 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 HMGCS2P54868 508 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ADAM17P78536 824 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 PPIL2Q13356 520 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 CEACAM7Q14002 265 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 EPGNQ6UW88 154 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TMEM26Q6ZUK4 368 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 IGDCC3Q8IVU1 814 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TMCO5AQ8N6Q1 288 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 PPM1NQ8N819 430 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 XXYLT1Q8NBI6 393 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 RDH13Q8NBN7 331 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ZSWIM2Q8NEG5 633 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 RSAD2Q8WXG1 361 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 HOXD1Q9GZZ0 328 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 CD320Q9NPF0 282 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 PXMP2Q9NR77 195 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 DUS2Q9NX74 493 aaKnown RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 PSME2Q9UL46 239 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 DOCK1Q14185 1865 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 FAM172BPA6NC97 362 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TMX2-CTNND1H3BSU7 103 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 GSRP00390 522 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 CDKN2BP42772 138 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 NME5P56597 212 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 EIF3EP60228 445 aaKnown RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 GCNT1Q02742 428 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 GNA12Q03113 381 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 BAATQ14032 418 aaPredicted RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 CCDC14Q49A88 953 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF394Q53GI3 561 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 WDR45BQ5MNZ6 344 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 PPM1LQ5SGD2 360 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ZCCHC23Q6ZST2 131 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 USP43Q70EL4 1123 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 NIPA1Q7RTP0 329 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 MYO1HQ8N1T3 1032 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 REPS2Q8NFH8 660 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ASB9Q96DX5 294 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TMA16Q96EY4 203 aaKnown RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF486Q96H40 463 aaPredicted RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TXNDC15Q96J42 360 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 LENG8Q96PV6 779 aaPredicted RBP19.56■□□□□ 0.72
HMGA1-205ENST00000447654 SORT1Q99523 831 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 SLC4A5Q9BY07 1137 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 GPRC5CQ9NQ84 441 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF112Q9UJU3 913 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 N6AMT1Q9Y5N5 214 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TBKBP1A7MCY6 615 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 RNF103O00237 685 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 TRIM38O00635 465 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 TADA2AO75478 443 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 CPNE6O95741 557 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 KRT6AP02538 564 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 KRT6BP04259 564 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 KCNA2P16389 499 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 JUNBP17275 347 aaPredicted RBP19.55■□□□□ 0.72
HMGA1-205ENST00000447654 GLDCP23378 1020 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 OTUD4Q01804 1114 aaKnown RBP19.55■□□□□ 0.72
HMGA1-205ENST00000447654 OCA2Q04671 838 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 CPNE9Q8IYJ1 553 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 LSMEM2Q8N112 164 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF786Q8N393 782 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 ADAMTS10Q9H324 1103 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 CNGB3Q9NQW8 809 aa19.55■□□□□ 0.72
HMGA1-205ENST00000447654 NXF1Q9UBU9 619 aaKnown RBP19.55■□□□□ 0.72
HMGA1-205ENST00000447654 AIM2O14862 343 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ZBTB14O43829 449 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 GLRA3O75311 464 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 RALBP11234 206 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 PIK3R1P27986 724 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 HPCAL1P37235 193 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 RHDQ02161 417 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF280DQ6N043 979 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 PHF13Q86YI8 300 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 CTAGE3PQ8IX95 158 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 SNX31Q8N9S9 440 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 FEZF2Q8TBJ5 459 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 FEM1CQ96JP0 617 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 POLR1BQ9H9Y6 1135 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 USTQ9Y2C2 406 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 LOC105371267A0A1B0GV96 52 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 PI4K2BG5E9Z4 385 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 TLR3O15455 904 aaKnown RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ZC3H11AO75152 810 aaKnown RBP eCLIP19.54■□□□□ 0.722e-11■□□□□ 8.9
HMGA1-205ENST00000447654 LYPLA1O75608 230 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ZMPSTE24O75844 475 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF182P17025 639 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 MZF1P28698 734 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 SLC7A1P30825 629 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 GJC1P36383 396 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 QARSP47897 775 aaKnown RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 TPTEP56180 551 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 C1QBPQ07021 282 aaKnown RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 TRAP1Q12931 704 aaKnown RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ADGRF2Q8IZF7 708 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 OR13F1Q8NGS4 319 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 ANGPTL6Q8NI99 470 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 SUN5Q8TC36 379 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms