RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TM9SF1O15321 606 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MAFKO60675 156 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 SUN1O94901 812 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MT-CYBP00156 380 aaPredicted RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MS4A13Q5J8X5 152 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MANEALQ5VSG8 457 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 RAP1GAP2Q684P5 730 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 ANKRD33Q7Z3H0 272 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 YTHDF3Q7Z739 585 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 RASSF3Q86WH2 238 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCNJLQ8IV13 435 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 GPATCH11Q8N954 259 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCDC63Q8NA47 563 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZNF75CPQ92670 426 aaPredicted RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZNF669Q96BR6 464 aaPredicted RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC39A13Q96H72 371 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 APOPT1Q96IL0 206 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 C1orf74Q96LT6 269 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 FCRL3Q96P31 734 aaPredicted RBP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 NACA2Q9H009 215 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCSER2Q9H7U1 834 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 RBM22Q9NW64 420 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 TXNDC16Q9P2K2 825 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 PHTF1Q9UMS5 762 aa9.73□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC38A8A6NNN8 435 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 MATN3O15232 486 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 TBC1D4O60343 1298 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CNTN5O94779 1100 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CXCL10P02778 98 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 RPL10AP62906 217 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 USP41Q3LFD5 358 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ALFQ53S48 1182 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 STEAP4Q687X5 459 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 KCTD11Q693B1 232 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 MSANTD2Q6P1R3 559 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCDC91Q7Z6B0 441 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ATP6V0D2Q8N8Y2 350 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 IPMKQ8NFU5 416 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 DIS3LQ8TF46 1054 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 SRPK1Q96SB4 655 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 NAT9Q9BTE0 207 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZYG11BQ9C0D3 744 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 LRRC40Q9H9A6 602 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CASS4Q9NQ75 786 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CHRAC1Q9NRG0 131 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 PCMTD2Q9NV79 361 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CLIC5Q9NZA1 410 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 IL37Q9NZH6 218 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZFATQ9P243 1243 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZNF638Q14966 1978 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 NLRC5Q86WI3 1866 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 HMX2A2RU54 273 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ERI2A8K979 691 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 TLR5O60602 858 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 RFPL1O75677 317 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ALDH1A2O94788 518 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 F7P08709 466 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ATF6P18850 670 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 HOXC13P31276 330 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 HTR7P34969 479 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC18A2Q05940 514 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ITKQ08881 620 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CGB2Q6NT52 195 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CDHR3Q6ZTQ4 885 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 SH2D5Q6ZV89 423 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 CIR1Q86X95 450 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 NDUFAF2Q8N183 169 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 MTBPQ96DY7 904 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 MFSD3Q96ES6 412 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ATXN7L3BQ96GX2 97 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 BTN2A3PQ96KV6 586 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZNF512Q96ME7 567 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 RPRD1AQ96P16 312 aaPredicted RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 TSGA13Q96PP4 275 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 MANSC1Q9H8J5 431 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 OLA1Q9NTK5 396 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 IPO11Q9UI26 975 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 AAR2Q9Y312 384 aaKnown RBP9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 PSAT1Q9Y617 370 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 TTC3P53804 2025 aa9.72□□□□□ -0.85
COL6A4P1-201ENST00000446690 FAM92AA1XBS5 289 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 PMPCBO75439 489 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 SERPINB9P50453 376 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 NEK3P51956 506 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 PDE1BQ01064 536 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 SMARCB1Q12824 385 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 SPRED3Q2MJR0 410 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 SPANXN3Q5MJ09 141 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 ARTNQ5T4W7 220 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 NAPEPLDQ6IQ20 393 aa9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.85
COL6A4P1-201ENST00000446690 FBXL22Q6P050 247 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms