RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM57BQ71RH2 274 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 GALNT7Q86SF2 657 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ADGRF4Q8IZF3 695 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ANKRD44Q8N8A2 993 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 IL17REQ8NFR9 667 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 RNFT2Q96EX2 444 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 PHF7Q9BWX1 381 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 CTDSP1Q9GZU7 261 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ACAD9Q9H845 621 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 NRIP3Q9NQ35 241 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 HDAC6Q9UBN7 1215 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 SLC25A13Q9UJS0 675 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 TNFSF13BQ9Y275 285 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 TRBV5-3A0A0A0MS03 114 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 A0A1B0GVC2 190 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 SYN3O14994 580 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 HOXC11O43248 304 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 TLR2O60603 784 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 CNOT3O75175 753 aaKnown RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 NEURL1O76050 574 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 METTL18O95568 372 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 AGR2O95994 175 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 CYP4B1P13584 511 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 TNNT1P13805 278 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 GSTM2P28161 218 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 TUBP50607 506 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 ARHGAP8P85298 464 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 Q4G0T1 1027 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 RUNDC3AQ59EK9 446 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 WDR45BQ5MNZ6 344 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZKSCAN2Q63HK3 967 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 ATG16L1Q676U5 607 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 KLBQ86Z14 1044 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 CNGA4Q8IV77 575 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 BRSK2Q8IWQ3 736 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 STAMQ92783 540 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 COQ8BQ96D53 544 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 TBATAQ96M53 351 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 EIF2AK1Q9BQI3 630 aaKnown RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 SLC29A3Q9BZD2 475 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 STN1Q9H668 368 aaKnown RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZNF304Q9HCX3 659 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 IFT80Q9P2H3 777 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 IPO11Q9UI26 975 aaKnown RBP4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 UTS2RQ9UKP6 389 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 BTBD3Q9Y2F9 522 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 CRYL1Q9Y2S2 319 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 EEA1Q15075 1411 aa4.95□□□□□ -1.62
HMGB3P6-201ENST00000444896 BAZ1BQ9UIG0 1483 aaKnown RBP4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 FAM90A7PA6NKC0 464 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 FAM90A22PA8MWA6 464 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 FAM90A12PA8MX19 464 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 FAM90A23PA8MXZ1 464 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 TSPAN3O60637 253 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 NFATC1O95644 943 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 HNF1BP35680 557 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 MTNR1AP48039 350 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 OAZ1P54368 228 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 ID2Q02363 134 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 BYSLQ13895 437 aaKnown RBP4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 PLK5Q496M5 336 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 MTX3Q5HYI7 312 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 TTLL5Q6EMB2 1281 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 NAPEPLDQ6IQ20 393 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 PAPOLBQ9NRJ5 636 aaKnown RBP4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 TMEM45AQ9NWC5 275 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 UPB1Q9UBR1 384 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 LAMP3Q9UQV4 416 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 GDAQ9Y2T3 454 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 AFG3L2Q9Y4W6 797 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZNF804BA4D1E1 1349 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 ATAD2BQ9ULI0 1458 aa4.94□□□□□ -1.62
HMGB3P6-201ENST00000444896 A0A0G2JK05 382 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 KIR2DS5A0A0G2JLQ3 304 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 KIR2DS3K7RE56 304 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 FCGR2AP12318 317 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 PAX3P23760 479 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 ABCC8Q09428 1581 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 TRIP6Q15654 476 aaKnown RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 AP5B1Q2VPB7 878 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 ALFQ53S48 1182 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 UBAP2Q5T6F2 1119 aaKnown RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 ASPHD1Q5U4P2 390 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 PIP4P1Q86T03 277 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 LSM14AQ8ND56 463 aaKnown RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 VOPP1Q96AW1 172 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 HVCN1Q96D96 273 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 MSI2Q96DH6 328 aaKnown RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 GPR63Q9BZJ6 419 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 TAOK3Q9H2K8 898 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 SPAG4Q9NPE6 437 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 WASH6PQ9NQA3 447 aa4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 AGO2Q9UKV8 859 aaKnown RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 TTBK1Q5TCY1 1321 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P6-201ENST00000444896 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 A0A1W2PPC1 479 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 SH2D7A6NKC9 451 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms