RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 DHX35Q9H5Z1 703 aaKnown RBP12.57□□□□□ -0.4
LTBR-204ENST00000444814 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 MPP6Q9NZW5 540 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 NCDNQ9UBB6 729 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 RAPGEFL1Q9UHV5 662 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
LTBR-204ENST00000444814 NDUFS2O75306 463 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 KRT7P08729 469 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 MIPP30301 263 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 MAN1A1P33908 653 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 GNA12Q03113 381 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CAMK2GQ13555 558 aaPredicted RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 HNRNPA1L2Q32P51 320 aaKnown RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SPDYCQ5MJ68 293 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ZNF776Q68DI1 518 aaPredicted RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 ZNF683Q8IZ20 524 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 LZTR1Q8N653 840 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 RTL3Q8N8U3 475 aaKnown RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 MDGA1Q8NFP4 955 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 WFDC5Q8TCV5 224 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 RFFLQ8WZ73 363 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 LMLNQ96KR4 655 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ACOX2Q99424 681 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CHP1Q99653 195 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SPON2Q9BUD6 331 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 TMEM245Q9H330 911 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ATP13A1Q9HD20 1204 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SMG5Q9UPR3 1016 aaKnown RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 A0A1W2PQF6 199 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CLGNO14967 610 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 AP5Z1O43299 807 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 LRCH4O75427 683 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CNTN5O94779 1100 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 DNTTP04053 509 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SLC1A1P43005 524 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 MAGEA1P43355 309 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 HCAR3P49019 387 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 OGDHQ02218 1023 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 KRT81Q14533 505 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ELAVL3Q14576 367 aaKnown RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 POLD3Q15054 466 aaPredicted RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 PARP15Q460N3 678 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ALFQ53S48 1182 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 MANEALQ5VSG8 457 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 TMEM215Q68D42 235 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 LPCAT2Q7L5N7 544 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 TMPRSS6Q8IU80 811 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ATP11CQ8NB49 1132 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CASKIN2Q8WXE0 1202 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SORCS1Q8WY21 1168 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 OR8D1Q8WZ84 308 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 RUBCNQ92622 972 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 MYEOVQ96EZ4 313 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
LTBR-204ENST00000444814 ANLNQ9NQW6 1124 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
LTBR-204ENST00000444814 ARHGAP42A6NI28 874 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 C1QTNF3-AMACRE9PGA6 284 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 CBX4O00257 560 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 ALOX15BO15296 676 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 GFRA3O60609 400 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 PROSCO94903 275 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 GABRG2P18507 467 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 PRKCHP24723 683 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 SERPINB6P35237 376 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 PXNP49023 591 aaPredicted RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 NDST2P52849 883 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 PTPRNQ16849 979 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 PPP6R3Q5H9R7 873 aaPredicted RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 APCDD1Q8J025 514 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 P2RY11Q96G91 374 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 BAG1Q99933 345 aaPredicted RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 TPSD1Q9BZJ3 242 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 CEP44Q9C0F1 390 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 ZDHHC4Q9NPG8 344 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 INTS6Q9UL03 887 aaKnown RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
LTBR-204ENST00000444814 NENFQ9UMX5 172 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 HS3ST2Q9Y278 367 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 SNX10Q9Y5X0 201 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 RAD54BQ9Y620 910 aa12.55□□□□□ -0.4
LTBR-204ENST00000444814 MYOFQ9NZM1 2061 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 ATP9BO43861 1147 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms