RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 BCLAF3A2AJT9 711 aaKnown RBP19.33■□□□□ 0.69
PMPCB-204ENST00000444457 MDM4O15151 490 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 ALOX15P16050 662 aaPredicted RBP19.33■□□□□ 0.69
PMPCB-204ENST00000444457 ZFP1Q6P2D0 407 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 ADGRF2Q8IZF7 708 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 PPP1R14CQ8TAE6 165 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 ZNF670Q9BS34 389 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 RTKNQ9BST9 563 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 FRMD8Q9BZ67 464 aaPredicted RBP19.33■□□□□ 0.69
PMPCB-204ENST00000444457 OSBPL6Q9BZF3 934 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 PLAC1Q9HBJ0 212 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 SMYD2Q9NRG4 433 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 RRN3Q9NYV6 651 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 DERAQ9Y315 318 aa19.33■□□□□ 0.69
PMPCB-204ENST00000444457 GABBR2O75899 941 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 MAP3K6O95382 1288 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 FGF3P11487 239 aaPredicted RBP19.33■□□□□ 0.68
PMPCB-204ENST00000444457 COX4I1P13073 169 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 SLC1A6P48664 564 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 RAB15P59190 212 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 CCNA1P78396 465 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 PFKPQ01813 784 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 PDCD4Q53EL6 469 aaKnown RBP19.33■□□□□ 0.68
PMPCB-204ENST00000444457 VPS50Q96JG6 964 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 KLC2Q9H0B6 622 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 PLEKHA5Q9HAU0 1116 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 POPDC2Q9HBU9 364 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 SNTG2Q9NY99 539 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 HESX1Q9UBX0 185 aa19.33■□□□□ 0.68
PMPCB-204ENST00000444457 HEMK1Q9Y5R4 338 aaPredicted RBP19.33■□□□□ 0.68
PMPCB-204ENST00000444457 LOC100653049A0A140TA62 436 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 HMX2A2RU54 273 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 UGT1A9O60656 530 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 KRT34O76011 436 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 STT3AP46977 705 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 KIZQ2M2Z5 673 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 STXBP5Q5T5C0 1151 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 FAXCQ5TGI0 409 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 TSPAN14Q8NG11 270 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 GTF3C2Q8WUA4 911 aaPredicted RBP19.32■□□□□ 0.68
PMPCB-204ENST00000444457 SNX27Q96L92 541 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 B3GNT5Q9BYG0 378 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 UGT1A7Q9HAW7 530 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 UGT1A10Q9HAW8 530 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 UGT1A8Q9HAW9 530 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 SQORQ9Y6N5 450 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 ZNF195O14628 629 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 E2F6O75461 281 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 SERPINB7O75635 380 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 CSH1P0DML2 217 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 CSH2P0DML3 217 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 ENTPD1P49961 510 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 PPP6R3Q5H9R7 873 aaPredicted RBP19.32■□□□□ 0.68
PMPCB-204ENST00000444457 LPCAT2Q7L5N7 544 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 RSPH3Q86UC2 560 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 PHTF2Q8N3S3 785 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 TRPC4APQ8TEL6 797 aa19.32■□□□□ 0.68
PMPCB-204ENST00000444457 LIN28AQ9H9Z2 209 aaKnown RBP19.32■□□□□ 0.68
PMPCB-204ENST00000444457 ZC3H7BQ9UGR2 993 aaKnown RBP19.32■□□□□ 0.68
PMPCB-204ENST00000444457 PRPF19Q9UMS4 504 aaKnown RBP19.32■□□□□ 0.68
PMPCB-204ENST00000444457 PDCD11Q14690 1871 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 A0A1B0GTW7 788 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 TRPA1O75762 1119 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 ZMPSTE24O75844 475 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 ALDH2P05091 517 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 TFE3P19532 575 aaPredicted RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 MAGEA6P43360 314 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 PDAP1Q13442 181 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 ELMSAN1Q6PJG2 1045 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 CAND1Q86VP6 1230 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 ZDHHC17Q8IUH5 632 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 CHERPQ8IWX8 916 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 LILRA2Q8N149 483 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 LZTR1Q8N653 840 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 DQX1Q8TE96 717 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 KBTBD7Q8WVZ9 684 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 CCT7Q99832 543 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 TRIM56Q9BRZ2 755 aaKnown RBP19.31■□□□□ 0.68
PMPCB-204ENST00000444457 ITGB1BP2Q9UKP3 347 aa19.31■□□□□ 0.68
PMPCB-204ENST00000444457 TRIM43BA6NCK2 446 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 ZNF487B1APH4 448 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
PMPCB-204ENST00000444457 TOP3BO95985 862 aaKnown RBP19.3■□□□□ 0.68
PMPCB-204ENST00000444457 NUP107P57740 925 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 SNX16P57768 344 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 NAA20P61599 178 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 MRPS22P82650 360 aaKnown RBP19.3■□□□□ 0.68
PMPCB-204ENST00000444457 GRAMD4Q6IC98 578 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 OR6B3Q8NGW1 331 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 LRRN4Q8WUT4 740 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 SORT1Q99523 831 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 CORO1BQ9BR76 489 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 EIF2AQ9BY44 585 aaKnown RBP19.3■□□□□ 0.68
PMPCB-204ENST00000444457 CNOT11Q9UKZ1 510 aaKnown RBP19.3■□□□□ 0.68
PMPCB-204ENST00000444457 GINS2Q9Y248 185 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 APRTP07741 180 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 MMP3P08254 477 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 PDGFRBP09619 1106 aa19.3■□□□□ 0.68
PMPCB-204ENST00000444457 CYP2F1P24903 491 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms