RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SNAP91O60641 907 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 MOCS3O95396 460 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 MT-CO1P00395 513 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 DNTTP04053 509 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 SPINK2P20155 84 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
SF3A1-203ENST00000444440 DRD3P35462 400 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 PSMD8P48556 350 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 SNX16P57768 344 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ATP11AP98196 1134 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 UBXN1Q04323 297 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ZBTB16Q05516 673 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF252P-AS1Q0IIN9 211 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 SLC12A1Q13621 1099 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CDO1Q16878 200 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CCDC14Q49A88 953 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 WDR45BQ5MNZ6 344 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 FKBP15Q5T1M5 1219 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
SF3A1-203ENST00000444440 TFAP2DQ7Z6R9 452 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF677Q86XU0 584 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 SNX19Q92543 992 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 FUCA2Q9BTY2 467 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 BTBD1Q9H0C5 482 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 NEUROG2Q9H2A3 272 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 DNAAF2Q9NVR5 837 aaKnown RBP11.18□□□□□ -0.62
SF3A1-203ENST00000444440 FBXL12Q9NXK8 326 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 SARDHQ9UL12 918 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 STAP1Q9ULZ2 295 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 NEU3Q9UQ49 428 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ARID1BQ8NFD5 2236 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 ACACBO00763 2458 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 CELSR3Q9NYQ7 3312 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 COL5A1P20908 1838 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SPAARA0A1B0GVQ0 90 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 A0A1B0GVT2 93 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 TCRBV5S1A1TA0A578 114 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 TARSL2A2RTX5 802 aaKnown RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 C2CD4BA6NLJ0 364 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 E9PAM4 449 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 K7ERQ8 282 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 WNT9AO14904 365 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 ATP9BO43861 1147 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 CLDN11O75508 207 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 ENDOD1O94919 500 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SLC8A1P32418 973 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 STAT1P42224 750 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 CSNK1EP49674 416 aaKnown RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 GALCP54803 685 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 CDH4P55283 916 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 CLEC16AQ2KHT3 1053 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 E4F1Q66K89 784 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 NCEH1Q6PIU2 408 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 Q6ZVU0 165 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SH2D3CQ8N5H7 860 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 RXFP2Q8WXD0 754 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 SYT11Q9BT88 431 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 TM9SF3Q9HD45 589 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 NDFIP2Q9NV92 336 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 VPS51Q9UID3 782 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 FNDC3AQ9Y2H6 1198 aaKnown RBP11.17□□□□□ -0.62
SF3A1-203ENST00000444440 ACTL7AQ9Y615 435 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
SF3A1-203ENST00000444440 FAM47DPA6NHR8 397 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FAM72CH0Y354 149 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 KCNK3O14649 394 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SMAD6O43541 496 aaKnown RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SH3BP5O60239 455 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 OPHN1O60890 802 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SRGAP2O75044 1071 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 RNASEH2AO75792 299 aaKnown RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FSBPO95073 299 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 WNT1P04628 370 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 CTSLP07711 333 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 RHOCP08134 193 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SYPP08247 313 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SRCP12931 536 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 CEACAM1P13688 526 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 GNSP15586 552 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 RDXP35241 583 aaKnown RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 ATXN3P54252 364 aaPredicted RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 ADPRHP54922 357 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 GSCP56915 257 aaPredicted RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 PPP2CBP62714 309 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 PPP2CAP67775 309 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 DLG2Q15700 870 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 KLHL40Q2TBA0 621 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms