RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 PTPRNQ16849 979 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ARTNQ5T4W7 220 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 NLRP14Q86W24 1093 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 RTL3Q8N8U3 475 aaKnown RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 MDGA1Q8NFP4 955 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ALG14Q96F25 216 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 BTBD6Q96KE9 485 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 SPACA7Q96KW9 195 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 FAM86C1Q9NVL1 165 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 POLR3BQ9NW08 1133 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ZNF212Q9UDV6 495 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 RAB23Q9ULC3 237 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 OR51B4Q9Y5P0 310 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 R4GN57 208 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 A0A0A6YYK5 440 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 EDDM13A0A1B0GTR0 161 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 SOWAHDA6NJG2 315 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 H3BRJ5 948 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 NRDCO43847 1150 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 RNASEH1O60930 286 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 ZNF217O75362 1048 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 RPP40O75818 363 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 KRT7P08729 469 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 ACADMP11310 421 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 GABRG2P18507 467 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PRKCHP24723 683 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 SLC1A1P43005 524 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 NOP2P46087 812 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PXNP49023 591 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CLCN6P51797 869 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 HADHBP55084 474 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 SLC25A11Q02978 314 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 DMWDQ09019 674 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 SFSWAPQ12872 951 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 MESDQ14696 234 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 POLD3Q15054 466 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 DPYSL2Q16555 572 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 HNRNPA1L2Q32P51 320 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PARP15Q460N3 678 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 IL31Q6EBC2 164 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CEP68Q76N32 757 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 OR2T3Q8NH03 318 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 HSPH1Q92598 858 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 ANP32BQ92688 251 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PRCCQ92733 491 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 NKD2Q969F2 451 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CCDC114Q96M63 670 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 SPON2Q9BUD6 331 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 EPC1Q9H2F5 836 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 PRDM16Q9HAZ2 1276 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 CD248Q9HCU0 757 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 OSGEPQ9NPF4 335 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 GPATCH2LQ9NWQ4 482 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 RCOR3Q9P2K3 495 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 DNAI1Q9UI46 699 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 NEU3Q9UQ49 428 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-211ENST00000443563 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
HDAC6-211ENST00000443563 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ZSCAN5CA6NGD5 496 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 CBX4O00257 560 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ATP9BO43861 1147 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 LMNAP02545 664 aaKnown RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 RARAP10276 462 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 HLA-EP13747 358 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 GOT1P17174 413 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 NDUFV2P19404 249 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 IL1R2P27930 398 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 PLA2G5P39877 138 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 CTSOP43234 321 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 NDST2P52849 883 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ZBTB16Q05516 673 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 SIM2Q14190 667 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 KRT81Q14533 505 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 CA9Q16790 459 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 SMTNL2Q2TAL5 461 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms