RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 INHBEP58166 350 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 FASTKQ14296 549 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC25A52Q3SY17 297 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 C16orf59Q7L2K0 433 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 NDRG1Q92597 394 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 CDRT15Q96T59 188 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 TBC1D10AQ9BXI6 508 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 MRPL9Q9BYD2 267 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 DHX15O43143 795 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 FASTKD3Q14CZ7 662 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 TEKT4Q8WW24 435 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 EMILIN2Q9BXX0 1053 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 FOXO6A8MYZ6 492 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 ATP5C1P36542 298 aaKnown RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 DAB2P98082 770 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 FAM110CQ1W6H9 321 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 RNF43Q68DV7 783 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 TBC1D19Q8N5T2 526 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 TOP6BLQ8N6T0 577 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC4A11Q8NBS3 891 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 DIS3LQ8TF46 1054 aaKnown RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 STK32AQ8WU08 396 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 CSPG4P5Q96PW8 444 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 ELOVL6Q9H5J4 265 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 FBXO6Q9NRD1 293 aaPredicted RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 COL14A1Q05707 1796 aaKnown RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 PAPSS1O43252 624 aaPredicted RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 TREHO43280 583 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 DAB1O75553 588 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 CD48P09326 243 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 STRADAQ7RTN6 431 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 HORMAD1Q86X24 394 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 PLD5Q8N7P1 536 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 SIKE1Q9BRV8 207 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 KLHL4Q9C0H6 718 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC17A7Q9P2U7 560 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 PCDHGC3Q9UN70 934 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 RPL9P32969 192 aaKnown RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 ADRA1BP35368 520 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 HIST2H2ACQ16777 129 aaPredicted RBP22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 HIST2H2AA3Q6FI13 130 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 DLK2Q6UY11 383 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 RIPOR1Q6ZS17 1223 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 ZBTB49Q6ZSB9 765 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 OTULINQ96BN8 352 aa22.79■■□□□ 1.24
CTDSPL-206ENST00000443503 BTN3A1O00481 513 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 CCNT2O60583 730 aaKnown RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 FMO4P31512 558 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 PGBD3Q8N328 593 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 CPT1BQ92523 772 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 C12orf42Q96LP6 360 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 MECRQ9BV79 373 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 ZNF7P17097 686 aaPredicted RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 PSMC3P17980 439 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 SKIV2L2P42285 1042 aaKnown RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 RPL14P50914 215 aaKnown RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 MAXP61244 160 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 TNS4Q8IZW8 715 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 ZNF556Q9HAH1 456 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 C15orf41Q9Y2V0 281 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 MRASO14807 208 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 TSPAN1O60635 241 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 ITIH5Q86UX2 942 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC41A1Q8IVJ1 513 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 METTL6Q8TCB7 284 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 SYBUQ9NX95 663 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 CROTQ9UKG9 612 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 COL1A2P08123 1366 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 KLRG2A4D1S0 409 aaPredicted RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 CCDC166P0CW27 439 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 PBLDP30039 288 aaPredicted RBP22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 HALP42357 657 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 PLD1Q13393 1074 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 TNIP2Q8NFZ5 429 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 ALG9Q9H6U8 611 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 DERAQ9Y315 318 aa22.78■■□□□ 1.24
CTDSPL-206ENST00000443503 NFKBIEO00221 500 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 EDF1O60869 148 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 CCNG1P51959 295 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 HADHBP55084 474 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 MBTD1Q05BQ5 628 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 NOMO2Q5JPE7 1267 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 ANKS3Q6ZW76 656 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 CMC1Q7Z7K0 106 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 OTUB1Q96FW1 271 aaPredicted RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 EIF2AQ9BY44 585 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 ACE2Q9BYF1 805 aaPredicted RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 KIF1CO43896 1103 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 MTA2O94776 668 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 PTP4A2Q12974 167 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 XRCC4Q13426 336 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 MIER2Q8N344 545 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 AGAP11Q8TF27 550 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 SFMBT1Q9UHJ3 866 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 GIT1Q9Y2X7 761 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 PIRTP0C851 137 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms