RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 DUS2Q9NX74 493 aaKnown RBP16.28■□□□□ 0.2
MCF2L-217ENST00000441756 MARK1Q9P0L2 795 aa16.28■□□□□ 0.2
MCF2L-217ENST00000441756 TRHDEQ9UKU6 1024 aa16.28■□□□□ 0.2
MCF2L-217ENST00000441756 HPCAL4Q9UM19 191 aa16.28■□□□□ 0.2
MCF2L-217ENST00000441756 NEU2Q9Y3R4 380 aa16.28■□□□□ 0.2
MCF2L-217ENST00000441756 USP15Q9Y4E8 981 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-217ENST00000441756 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 MYO9BQ13459 2157 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 HEPACAM2A8MVW5 462 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SMAPO00193 183 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 RNF103O00237 685 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 MAFKO60675 156 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 GCATO75600 419 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 FOSL2P15408 326 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SGSHP51688 502 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 GDF10P55107 478 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 MRPS25P82663 173 aaKnown RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 IL10RBQ08334 325 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SERINC3Q13530 473 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 RNF43Q68DV7 783 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 ITPRIPL1Q6GPH6 555 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 TPGS1Q6ZTW0 290 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 PCGF5Q86SE9 256 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 DEPDC1BQ8WUY9 529 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 MYLIPQ8WY64 445 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 IRF7Q92985 503 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 HMCESQ96FZ2 354 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SPATA13Q96N96 652 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 ZNF599Q96NL3 588 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 PPP1R2P1Q96PQ5 205 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 PARD6BQ9BYG5 372 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 TRIM31Q9BZY9 425 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 MUC3BQ9H195 1237 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 DPH5Q9H2P9 285 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 POMKQ9H5K3 350 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 NOL6Q9H6R4 1146 aaKnown RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 UBE2ZQ9H832 354 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 SEPT10Q9P0V9 454 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 WHRNQ9P202 907 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
MCF2L-217ENST00000441756 CDH22Q9UJ99 828 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 WNT6Q9Y6F9 365 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 DOCK6Q96HP0 2047 aa16.27■□□□□ 0.2
MCF2L-217ENST00000441756 TRIOBPQ9H2D6 2365 aa16.27■□□□□ 0.19
MCF2L-217ENST00000441756 TRANK1O15050 2925 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 RANBP2P49792 3224 aaKnown RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 ZSCAN5CA6NGD5 496 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 MATN3O15232 486 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 PENKP01210 267 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 LAMP2P13473 410 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 VAV1P15498 845 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 ITIH2P19823 946 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 VIPR2P41587 438 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 CLCN6P51797 869 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 GPS1Q13098 491 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 SMAD4Q13485 552 aaKnown RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 HLTFQ14527 1009 aaKnown RBP eCLIP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 BRD3Q15059 726 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 TRIP13Q15645 432 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 TMCO4Q5TGY1 634 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 RNF219Q5W0B1 726 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 IL31Q6EBC2 164 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 CCDC33Q8N5R6 958 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 FIBINQ8TAL6 211 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 SUSD6Q92537 303 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 ARHGEF2Q92974 986 aaKnown RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 ELSPBP1Q96BH3 223 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 MYADMQ96S97 322 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 PNKPQ96T60 521 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 CDX2Q99626 313 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 ATP13A1Q9HD20 1204 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 KIAA1522Q9P206 1035 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 KLHL8Q9P2G9 620 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-217ENST00000441756 RAB21Q9UL25 225 aa16.26■□□□□ 0.19
MCF2L-217ENST00000441756 BHMG1C9JSJ3 638 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-217ENST00000441756 NEDD8-MDP1E9PL57 170 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 DYNC1I1O14576 645 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 ECI2O75521 394 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 CCNB1P14635 433 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 FCARP24071 287 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 RPL22P35268 128 aaKnown RBP16.25■□□□□ 0.19
MCF2L-217ENST00000441756 FDFT1P37268 417 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 VPS41P49754 854 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 RENBPP51606 427 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 GEMIN4P57678 1058 aaKnown RBP16.25■□□□□ 0.19
MCF2L-217ENST00000441756 GAD2Q05329 585 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 NR1H3Q13133 447 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-217ENST00000441756 FYB2Q5VWT5 728 aa16.25■□□□□ 0.19
MCF2L-217ENST00000441756 CXorf57Q6NSI4 855 aaKnown RBP16.25■□□□□ 0.19
MCF2L-217ENST00000441756 POTEHQ6S545 545 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms