RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NSMCE3Q96MG7 304 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 COG8Q96MW5 612 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 SLC29A1Q99808 456 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 DNAJC28Q9NX36 388 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 LCTP09848 1927 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 KRBA1A5PL33 1030 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 CFAP99D6REC4 459 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 AQP9O43315 295 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 C1QAP02745 245 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 MCF2P10911 925 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 NAT1P18440 290 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 NAMPTP43490 491 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 PCYT1AP49585 367 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 IKBKEQ14164 716 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 KYQ8NBH2 561 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 SPATA33Q96N06 139 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 SORT1Q99523 831 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 TMA7Q9Y2S6 64 aaKnown RBP17.14■□□□□ 0.33
PMS1-213ENST00000441310 HMX2A2RU54 273 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 BMP10O95393 424 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 GABRB3P28472 473 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 GNA15P30679 374 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 TUBA4AP68366 448 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SLC10A2Q12908 348 aaPredicted RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 SLC9B1Q4ZJI4 515 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 C10orf107Q8IVU9 208 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 THNSL1Q8IYQ7 743 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 LRTOMTQ8WZ04 291 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 HPS1Q92902 700 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 CIB1Q99828 191 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 PCDHB4Q9Y5E5 795 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 C1orf232A0A0U1RR37 186 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 TMEM191CA6NGB0 347 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 A8MU76 341 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SULT1C4O75897 302 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 GSRP00390 522 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 TMEM191BP0C7N4 346 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 GMPRP36959 345 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 TRAF2Q12933 501 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 NME3Q13232 169 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 ZACNQ401N2 412 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 C16orf89Q6UX73 402 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 TMEM174Q8WUU8 243 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
PMS1-213ENST00000441310 RCN3Q96D15 328 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 OSBPL11Q9BXB4 747 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SIAEQ9HAT2 523 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 PRPF19Q9UMS4 504 aaKnown RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 SOCS7O14512 581 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 NEMP1O14524 444 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 PMM2O15305 246 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SPAG6O75602 509 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 CST3P01034 146 aaPredicted RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 AMHP03971 560 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 C4BPAP04003 597 aaKnown RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 ETFBP38117 255 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 YWHAZP63104 245 aaKnown RBP17.13■□□□□ 0.33
PMS1-213ENST00000441310 KCNJ8Q15842 424 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 FAM160B1Q5W0V3 765 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 C14orf80Q86SX3 495 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 ZNF677Q86XU0 584 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 COG4Q9H9E3 785 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 ATAD3AQ9NVI7 634 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 BCAP29Q9UHQ4 241 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SLC8A2Q9UPR5 921 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 SNX13Q9Y5W8 968 aa17.13■□□□□ 0.33
PMS1-213ENST00000441310 ESRRBO95718 433 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 INHBBP09529 407 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 CLCN3P51790 818 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 GCNT1Q02742 428 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 PIGGQ5H8A4 983 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 DNAJC24Q6P3W2 148 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 RFX6Q8HWS3 928 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 CLIP3Q96DZ5 547 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 ZNF597Q96LX8 424 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 RAB6BQ9NRW1 208 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 ZNF195O14628 629 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 SERPINE1P05121 402 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 TXNP10599 105 aaKnown RBP17.12■□□□□ 0.33
PMS1-213ENST00000441310 MYL4P12829 197 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 ZNF182P17025 639 aaPredicted RBP17.12■□□□□ 0.33
PMS1-213ENST00000441310 TCEA1P23193 301 aaKnown RBP17.12■□□□□ 0.33
PMS1-213ENST00000441310 EDNRBP24530 442 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 RPS3AP61247 264 aaKnown RBP17.12■□□□□ 0.33
PMS1-213ENST00000441310 TANKQ92844 425 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 OR52B2Q96RD2 323 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 SYT17Q9BSW7 474 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 NIFKQ9BYG3 293 aaKnown RBP17.12■□□□□ 0.33
PMS1-213ENST00000441310 KLHL25Q9H0H3 589 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 SLC17A6Q9P2U8 582 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 DAPK2Q9UIK4 370 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 GNPTGQ9UJJ9 305 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms