RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 RRAGCQ9HB90 399 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CYP4F12Q9HCS2 524 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ATXN2Q99700 1313 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 SNX3O60493 162 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 NOL4O94818 638 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 VAPBO95292 243 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CKBP12277 381 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 SOAT1P35610 550 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 TNFSF9P41273 254 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 POLD2P49005 469 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 POLR2LP62875 67 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MRPS5P82675 430 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 PDK4Q16654 411 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 NEPROQ6NW34 567 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CYP4Z1Q86W10 505 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CCDC33Q8N5R6 958 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 COPS5Q92905 334 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 KREMEN1Q96MU8 473 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 EBNA1BP2Q99848 306 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 TMEM109Q9BVC6 243 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 TTYH3Q9C0H2 523 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MYLK2Q9H1R3 596 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ELOVL6Q9H5J4 265 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 DLGAP2Q9P1A6 1054 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 USP20Q9Y2K6 914 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 PCDHAC2Q9Y5I4 1007 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 TNRC6CQ9HCJ0 1690 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 OR6C75A6NL08 312 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ZNF839A8K0R7 811 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 F8W810 466 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 NR5A2O00482 541 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 STK25O00506 426 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ARHGEF9O43307 516 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 XYLBO75191 536 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 GJB6O95452 261 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CCNE2O96020 404 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 LTA4HP09960 611 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 UBTFL6P0CB48 400 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MLNP12872 115 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 TPH1P17752 444 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MMP8P22894 467 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ATP5C1P36542 298 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 C15orf59Q2T9L4 293 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 GALNTL6Q49A17 601 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 NOL9Q5SY16 702 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 PIGZQ86VD9 579 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MIER2Q8N344 545 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 NKX2-3Q8TAU0 364 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CXorf56Q9H5V9 222 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 DMAC2Q9NW81 257 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 UBP1Q9NZI7 540 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 CDV3Q9UKY7 258 aaKnown RBP6.51□□□□□ -1.37
CNOT1-202ENST00000441024 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
CNOT1-202ENST00000441024 KATNA1O75449 491 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 MSH3P20585 1137 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ADRA1DP25100 572 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 RRM2P31350 389 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 GRK3P35626 688 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ARL4DP49703 201 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 SCNN1GP51170 649 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 NEK2P51955 445 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ZNF280AP59817 542 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-202ENST00000441024 EVX2Q03828 476 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 LRRC74AQ0VAA2 488 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 CYP51A1Q16850 503 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 SAMD4BQ5PRF9 694 aaKnown RBP6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ARMC12Q5T9G4 340 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 GLT6D1Q7Z4J2 308 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 DEFB107AQ8IZN7 70 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 IRGQQ8WZA9 623 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 TADA1Q96BN2 335 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 CERS2Q96G23 380 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 KCTD14Q9BQ13 255 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-202ENST00000441024 SHCBP1LQ9BZQ2 653 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ZYG11BQ9C0D3 744 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 RAD21L1Q9H4I0 556 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 CDHR5Q9HBB8 845 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 CATSPERZQ9NTU4 200 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
CNOT1-202ENST00000441024 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 NDUFAF1Q9Y375 327 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 MYO5AQ9Y4I1 1855 aaKnown RBP6.5□□□□□ -1.37
CNOT1-202ENST00000441024 SF3B1O75533 1304 aaKnown RBP eCLIP6.5□□□□□ -1.372e-6■■■■■ 37.3
CNOT1-202ENST00000441024 A0A0U1RQJ8 604 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 MGAT4DA6NG13 374 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 M0R3G1 203 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 TPSB2P20231 275 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 ME2P23368 584 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 DGKAP23743 735 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 FASP25445 335 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 PSMB4P28070 264 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 RAD23AP54725 363 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 BTKQ06187 659 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 RUNX1T1Q06455 604 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 BCL2L1Q07817 233 aa6.5□□□□□ -1.37
CNOT1-202ENST00000441024 FOXD4Q12950 439 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms