RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 C12orf29Q8N999 325 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FAM174AQ8TBP5 190 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 MRRFQ96E11 262 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 GDAP1L1Q96MZ0 367 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 BTBD1Q9H0C5 482 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FAM49BQ9NUQ9 324 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PLXNB3Q9ULL4 1909 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 ITIH6Q6UXX5 1313 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FRYLO94915 3013 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 A0A087WV48 116 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 C10orf142B7Z368 130 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CETN3O15182 167 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 VILLO15195 856 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 TBX18O95935 607 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 IGLV3-27P01718 113 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 KLKB1P03952 638 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 DNTTP04053 509 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 DLDP09622 509 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SLC11A2P49281 568 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 ADKP55263 362 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 GNGT1P63211 74 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 RACK1P63244 317 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 EFEMP1Q12805 493 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 OVGP1Q12889 678 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CEP85LQ5SZL2 805 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PPP1R26Q5T8A7 1209 aaPredicted RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PDZD3Q86UT5 571 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 IQCHQ86VS3 1027 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 ZC3H3Q8IXZ2 948 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 ZCCHC9Q8N567 271 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 TC2NQ8N9U0 490 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 HJURPQ8NCD3 748 aaPredicted RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FAM76AQ8TAV0 307 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 DDI1Q8WTU0 396 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 JAKMIP2Q96AA8 810 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FAM81BQ96LP2 452 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 UBL7Q96S82 380 aaPredicted RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 LRRC4Q9HBW1 653 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 LZTFL1Q9NQ48 299 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CISHQ9NSE2 258 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 RAB20Q9NX57 234 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SLC12A8A0AV02 714 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 LRRC72A6NJI9 287 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 KCNJ18B7U540 433 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 P4HA2O15460 535 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 SLC7A4O43246 635 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 MOCS3O95396 460 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 SEMA4FO95754 770 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 GNA14O95837 355 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 EPHX1P07099 455 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ZNF18P17022 549 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 POLR2EP19388 210 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 HOXD9P28356 352 aaPredicted RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 HNF1BP35680 557 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 WASP42768 502 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 CTSKP43235 329 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 MXI1P50539 228 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 RAD23BP54727 409 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ST8SIA6P61647 398 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 DLG4P78352 724 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 TBX2Q13207 712 aaPredicted RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ADAM9Q13443 819 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 KCNJ12Q14500 433 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 NAA25Q14CX7 972 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 GEN1Q17RS7 908 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ZCWPW2Q504Y3 356 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ACBD5Q5T8D3 534 aaPredicted RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 TTC39BQ5VTQ0 682 aaPredicted RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 KIAA0895LQ68EN5 471 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 WDR93Q6P2C0 686 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 PIGZQ86VD9 579 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 SLC4A11Q8NBS3 891 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 FIBINQ8TAL6 211 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 RHBDD1Q8TEB9 315 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 SETD7Q8WTS6 366 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 NXPE2Q96DL1 559 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 IQCDQ96DY2 449 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 TMA16Q96EY4 203 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 HSFY1Q96LI6 401 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 AGAP3Q96P47 875 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 CAPS2Q9BXY5 557 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 MKRN2Q9H000 416 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 PABPC3Q9H361 631 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 CENPHQ9H3R5 247 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 APOBEC3GQ9HC16 384 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 HMGXB4Q9UGU5 601 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 GGA2Q9UJY4 613 aa6.21□□□□□ -1.41
PTPRR-204ENST00000440835 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.21□□□□□ -1.41
PTPRR-204ENST00000440835 TP53BP1Q12888 1972 aaPredicted RBP6.21□□□□□ -1.42
PTPRR-204ENST00000440835 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
PTPRR-204ENST00000440835 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
PTPRR-204ENST00000440835 SNUPNO95149 360 aaKnown RBP6.21□□□□□ -1.42
PTPRR-204ENST00000440835 TOP3BO95985 862 aaKnown RBP6.21□□□□□ -1.42
PTPRR-204ENST00000440835 ADH1BP00325 375 aa6.21□□□□□ -1.42
PTPRR-204ENST00000440835 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms