RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 RAB6BQ9NRW1 208 aa28.61■■■□□ 2.17
CGREF1-207ENST00000440612 SEPT10Q9P0V9 454 aa28.61■■■□□ 2.17
CGREF1-207ENST00000440612 ZMYM5Q9UJ78 669 aa28.61■■■□□ 2.17
CGREF1-207ENST00000440612 SHOC2Q9UQ13 582 aa28.61■■■□□ 2.17
CGREF1-207ENST00000440612 ZNF510Q9Y2H8 683 aa28.61■■■□□ 2.17
CGREF1-207ENST00000440612 C2orf16Q68DN1 1984 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 E2F8A0AVK6 867 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 MAP2K7O14733 419 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 OPHN1O60890 802 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 CLDN11O75508 207 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 ZNF189O75820 626 aaPredicted RBP28.6■■■□□ 2.17
CGREF1-207ENST00000440612 TMEM63AO94886 807 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 GAD2Q05329 585 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 CASP8Q14790 479 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 C4orf22Q6V702 233 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 GPR149Q86SP6 731 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 PPIL6Q8IXY8 311 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 ETNK1Q9HBU6 452 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 IPO11Q9UI26 975 aaKnown RBP28.6■■■□□ 2.17
CGREF1-207ENST00000440612 TBC1D30Q9Y2I9 924 aa28.6■■■□□ 2.17
CGREF1-207ENST00000440612 A0A1B0GVM2 712 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 TCAF2A6NFQ2 919 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 MTSS1O43312 755 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 RAMP2O60895 175 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 PPFIA2O75334 1257 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 YBEYP58557 167 aaPredicted RBP28.59■■■□□ 2.17
CGREF1-207ENST00000440612 PARP15Q460N3 678 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 FAXCQ5TGI0 409 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 TTC39BQ5VTQ0 682 aaPredicted RBP28.59■■■□□ 2.17
CGREF1-207ENST00000440612 HOOK3Q86VS8 718 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 CNTD1Q8N815 330 aa28.59■■■□□ 2.17
CGREF1-207ENST00000440612 TTYH1Q9H313 450 aaPredicted RBP28.59■■■□□ 2.17
CGREF1-207ENST00000440612 MTRF1LQ9UGC7 380 aaKnown RBP28.59■■■□□ 2.17
CGREF1-207ENST00000440612 MATN3O15232 486 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 TCF3P15923 654 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 CD68P34810 354 aaPredicted RBP28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ACTN2P35609 894 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ACVRL1P37023 503 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 IFI35P80217 286 aaPredicted RBP28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ZNF77Q15935 545 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 TEX44Q53QW1 395 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 CXorf57Q6NSI4 855 aaKnown RBP28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ANKRD54Q6NXT1 300 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 PCGF5Q86SE9 256 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ARID3BQ8IVW6 561 aaPredicted RBP28.58■■■□□ 2.17
CGREF1-207ENST00000440612 ZCCHC9Q8N567 271 aaKnown RBP28.58■■■□□ 2.17
CGREF1-207ENST00000440612 TTC16Q8NEE8 873 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 MAML1Q92585 1016 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 FATE1Q969F0 183 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 GORASP1Q9BQQ3 440 aa28.58■■■□□ 2.17
CGREF1-207ENST00000440612 A0A0D9SEW6 157 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 TNNT3P45378 269 aaPredicted RBP28.58■■■□□ 2.16
CGREF1-207ENST00000440612 BASP1P80723 227 aaKnown RBP28.58■■■□□ 2.16
CGREF1-207ENST00000440612 DHX9Q08211 1270 aaKnown RBP28.58■■■□□ 2.16
CGREF1-207ENST00000440612 USP4Q13107 963 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 ADAM15Q13444 863 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 SERINC3Q13530 473 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 POLD3Q15054 466 aaPredicted RBP28.58■■■□□ 2.16
CGREF1-207ENST00000440612 RNF43Q68DV7 783 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 ARHGEF2Q92974 986 aaKnown RBP28.58■■■□□ 2.16
CGREF1-207ENST00000440612 IL12RB2Q99665 862 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 APOL5Q9BWW9 433 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 IGSF9Q9P2J2 1179 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 CHD5Q8TDI0 1954 aa28.58■■■□□ 2.16
CGREF1-207ENST00000440612 ARHGAP42A6NI28 874 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 J3KR12 359 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 STK10O94804 968 aaKnown RBP28.57■■■□□ 2.16
CGREF1-207ENST00000440612 JCHAINP01591 159 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 WEE1P30291 646 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 SEMA5AQ13591 1074 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 UAP1Q16222 522 aaPredicted RBP28.57■■■□□ 2.16
CGREF1-207ENST00000440612 ARHGEF18Q6ZSZ5 1173 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 HJURPQ8NCD3 748 aaPredicted RBP28.57■■■□□ 2.16
CGREF1-207ENST00000440612 TMA16Q96EY4 203 aaKnown RBP28.57■■■□□ 2.16
CGREF1-207ENST00000440612 TEKT5Q96M29 485 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 LRRC3BQ96PB8 259 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 FERMT1Q9BQL6 677 aa28.57■■■□□ 2.16
CGREF1-207ENST00000440612 CHADO15335 359 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 ZBTB24O43167 697 aaPredicted RBP28.56■■■□□ 2.16
CGREF1-207ENST00000440612 TBL1XO60907 577 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 CCNB1P14635 433 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 GNA12Q03113 381 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 HDXQ7Z353 690 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 NPAS3Q8IXF0 933 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 VAT1Q99536 393 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 EPB41L4BQ9H329 900 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 LMCD1Q9NZU5 365 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 CLEC1BQ9P126 229 aa28.56■■■□□ 2.16
CGREF1-207ENST00000440612 HOXD9P28356 352 aaPredicted RBP28.55■■■□□ 2.16
CGREF1-207ENST00000440612 PID1Q7Z2X4 250 aa28.55■■■□□ 2.16
CGREF1-207ENST00000440612 SETD3Q86TU7 594 aaPredicted RBP28.55■■■□□ 2.16
CGREF1-207ENST00000440612 TDRD5Q8NAT2 981 aaKnown RBP28.55■■■□□ 2.16
CGREF1-207ENST00000440612 MAGEH1Q9H213 219 aa28.55■■■□□ 2.16
CGREF1-207ENST00000440612 TRHDEQ9UKU6 1024 aa28.55■■■□□ 2.16
CGREF1-207ENST00000440612 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 ILVBLA1L0T0 632 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 NDC80O14777 642 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 ZNF177Q13360 481 aaPredicted RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 PARP6Q2NL67 630 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 FSCBQ5H9T9 825 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms