RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TROVE2P10155 538 aaKnown RBP eCLIP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 PAX3P23760 479 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 DDR2Q16832 855 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 TBC1D25Q3MII6 688 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 FAM171A1Q5VUB5 890 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 PM20D1Q6GTS8 502 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 COLGALT2Q8IYK4 626 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 PPFIBP2Q8ND30 876 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 STMN2Q93045 179 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 PRR11Q96HE9 360 aaPredicted RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 DDX50Q9BQ39 737 aaKnown RBP14.49□□□□□ -0.09
LIMD1-202ENST00000440097 HEY2Q9UBP5 337 aa14.49□□□□□ -0.09
LIMD1-202ENST00000440097 MAP3K7O43318 606 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 SPAG6O75602 509 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 LRIG2O94898 1065 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 PSMB4P28070 264 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 SESN2P58004 480 aaPredicted RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 CRADDP78560 199 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 RINLQ6ZS11 566 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 MPP5Q8N3R9 675 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 PKMYT1Q99640 499 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 TRIM62Q9BVG3 475 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 WASF2Q9Y6W5 498 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 UNC80Q8N2C7 3258 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 TTC3P53804 2025 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF638Q14966 1978 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 DCLK1O15075 740 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 OPHN1O60890 802 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 PYGLP06737 847 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 ADRA1DP25100 572 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 GATMP50440 423 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 DSC1Q08554 894 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 BFSP2Q13515 415 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 CTXN3Q4LDR2 81 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 PRPF39Q86UA1 669 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 DCP1BQ8IZD4 617 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF398Q8TD17 642 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 GPR152Q8TDT2 470 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 PGAP3Q96FM1 320 aaPredicted RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 CELF6Q96J87 481 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 C12orf65Q9H3J6 166 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 TMEM161AQ9NX61 479 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 STX18Q9P2W9 335 aaKnown RBP14.48□□□□□ -0.09
LIMD1-202ENST00000440097 TTLL3Q9Y4R7 772 aa14.48□□□□□ -0.09
LIMD1-202ENST00000440097 MT-ND3P03897 115 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 FDFT1P37268 417 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PBX3P40426 434 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 CXCR3P49682 368 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 SCAPQ12770 1279 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PAFAH1B3Q15102 231 aaKnown RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PRKD1Q15139 912 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 SMAD1Q15797 465 aaKnown RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 VARS2Q5ST30 1063 aaKnown RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 ADGRD1Q6QNK2 874 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF567Q8N184 647 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 NPWQ8N729 165 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF184Q99676 751 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PRDM16Q9HAZ2 1276 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 XAB2Q9HCS7 855 aaKnown RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PNPLA8Q9NP80 782 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 ABCC13Q9NSE7 274 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 IQANK1A0A1B0GTG1 560 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 NT5C1B-RDH14C9J2C7 533 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 NBNO60934 754 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 CPB1P15086 417 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 GSTT1P30711 240 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 SERPINB6P35237 376 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 GPR15P49685 360 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 NEK3P51956 506 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 DYNC1I2Q13409 638 aaKnown RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 SEMA5AQ13591 1074 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 LRRC6Q86X45 466 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 MCUQ8NE86 351 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PTPRN2Q92932 1015 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 FBXO6Q9NRD1 293 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 PDP2Q9P2J9 529 aa14.47□□□□□ -0.09
LIMD1-202ENST00000440097 MAGED2Q9UNF1 606 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-202ENST00000440097 FAM155BO75949 473 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ZCCHC18P0CG32 403 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 TSHRP16473 764 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 TPSB2P20231 275 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 GLUD2P49448 558 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 THOC5Q13769 683 aaKnown RBP14.46□□□□□ -0.09
LIMD1-202ENST00000440097 TPSAB1Q15661 275 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 DCAKDQ8WVC6 231 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 FAM192AQ9GZU8 254 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ALG13Q9NP73 1137 aaKnown RBP14.46□□□□□ -0.09
LIMD1-202ENST00000440097 HCSTQ9UBK5 93 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 DFFAO00273 331 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 SERPINB3P29508 390 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 RANBP1P43487 201 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 PGFP49763 221 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 NFE2Q16621 373 aaPredicted RBP14.46□□□□□ -0.09
LIMD1-202ENST00000440097 UNC5AQ6ZN44 842 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 SLC43A3Q8NBI5 491 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ITFG2Q969R8 447 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms