RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
CCDC78-204ENST00000439619 ACACBO00763 2458 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 A0A1W2PPC4 97 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 ALOX15BO15296 676 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 ATP9BO43861 1147 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 ADCY5O95622 1261 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 PROS1P07225 676 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 SOX5P35711 763 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 STAT1P42224 750 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 NOMO3P69849 1222 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 CDR2Q01850 454 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 MYL5Q02045 173 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 CCDC15Q0P6D6 951 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 STX1AQ16623 288 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 KIF19Q2TAC6 998 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 INAVAQ3KP66 663 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 SLC45A4Q5BKX6 768 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 UNQ6494/PRO21346Q6UXR6 183 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 RBM43Q6ZSC3 357 aaKnown RBP19.32■□□□□ 0.68
CCDC78-204ENST00000439619 CDC6Q99741 560 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 FANCLQ9NW38 375 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 SERGEFQ9UGK8 458 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 NEUROG3Q9Y4Z2 214 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 PCDH15Q96QU1 1955 aa19.32■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3DA0A087WVF3 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3IA0A087WXS9 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3EA0A087X179 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3KA0A087X1G2 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TMEM8BA6NDV4 472 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3FA6NER0 549 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3LB9A6J9 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 SLC7A4O43246 635 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 MBD3O95983 291 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 IGHV4-34P06331 123 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3HP0C7X1 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 GGCXP38435 758 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 NUMBP49757 651 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 CCT8P50990 548 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 CCR5P51681 352 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 DLG2Q15700 870 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 ARL13BQ3SXY8 428 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3GQ6DHY5 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3CQ6IPX1 549 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 C14orf80Q86SX3 495 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 TBC1D3Q8IZP1 549 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-204ENST00000439619 ATP11CQ8NB49 1132 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 NEK11Q8NG66 645 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 GPT2Q8TD30 523 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 RHBDD1Q8TEB9 315 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 CAMK1GQ96NX5 476 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 HAPLN3Q96S86 360 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 GANQ9H2C0 597 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 KDM4CQ9H3R0 1056 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 IL21RQ9HBE5 538 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 NLRC4Q9NPP4 1024 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 AASDHPPTQ9NRN7 309 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 FNDC3AQ9Y2H6 1198 aaKnown RBP19.31■□□□□ 0.68
CCDC78-204ENST00000439619 SNX11Q9Y5W9 270 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 CEP192Q8TEP8 1941 aa19.31■□□□□ 0.68
CCDC78-204ENST00000439619 VILLO15195 856 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 HYAL3O43820 417 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-204ENST00000439619 SPINK2P20155 84 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 OR1E1P30953 314 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 NUDT1P36639 197 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 FLT3P36888 993 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 OTUD1Q5VV17 481 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-204ENST00000439619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-204ENST00000439619 SH2D3CQ8N5H7 860 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 AADATQ8N5Z0 425 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 FRS2Q8WU20 508 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 ALG14Q96F25 216 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 TMEM59LQ9UK28 342 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 NOCTQ9UK39 431 aaKnown RBP19.3■□□□□ 0.68
CCDC78-204ENST00000439619 PCOLCE2Q9UKZ9 415 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 WASF3Q9UPY6 502 aa19.3■□□□□ 0.68
CCDC78-204ENST00000439619 DRGXA6NNA5 263 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 E9PAM4 449 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 MCF2LO15068 1137 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 BNIP3LO60238 219 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 SRGAP2O75044 1071 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 VAV1P15498 845 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 TFE3P19532 575 aaPredicted RBP19.29■□□□□ 0.68
CCDC78-204ENST00000439619 SDC4P31431 198 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 RECQLP46063 649 aaPredicted RBP19.29■□□□□ 0.68
CCDC78-204ENST00000439619 NSFP46459 744 aaKnown RBP19.29■□□□□ 0.68
CCDC78-204ENST00000439619 IRAK1P51617 712 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 CLCN6P51797 869 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 COPB1P53618 953 aaKnown RBP19.29■□□□□ 0.68
CCDC78-204ENST00000439619 ADPRHP54922 357 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 FAM193AP78312 1265 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 BNC1Q01954 994 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 UBXN1Q04323 297 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 C2CD6Q53TS8 623 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 ZNF783Q6ZMS7 281 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 Q6ZVU0 165 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 PRPF39Q86UA1 669 aaKnown RBP19.29■□□□□ 0.68
CCDC78-204ENST00000439619 DCAF4L2Q8NA75 395 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 CFAP57Q96MR6 1250 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 ZYG11BQ9C0D3 744 aa19.29■□□□□ 0.68
CCDC78-204ENST00000439619 NAT10Q9H0A0 1025 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms