RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZPBP2Q6X784 338 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 NAPRTQ6XQN6 538 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 SETD3Q86TU7 594 aaPredicted RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 C1orf127Q8N9H9 656 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 DDHD1Q8NEL9 900 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 RP9Q8TA86 221 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 GRIN3AQ8TCU5 1115 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 CLEC4CQ8WTT0 213 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 LZICQ8WZA0 190 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 SPATA13Q96N96 652 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 SORT1Q99523 831 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 PIF1Q9H611 641 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 HES2Q9Y543 173 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 COL14A1Q05707 1796 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 TCRBV5S1A1TA0A578 114 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 BCLAF3A2AJT9 711 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 C9JVG2 144 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 H3BNX3 289 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 CRCPO75575 148 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 RNASEH2AO75792 299 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 IL1BP01584 269 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 OCM2P0CE71 109 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 OCMP0CE72 109 aaPredicted RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 ACAT1P24752 427 aaKnown RBP9.23□□□□□ -0.93
COPB1-202ENST00000439561 GPD2P43304 727 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 NUP107P57740 925 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 ZNF460Q14592 562 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 ADRM1Q16186 407 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 LY6KQ17RY6 165 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 FSTL4Q6MZW2 842 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 HERC6Q8IVU3 1022 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 NCSTNQ92542 709 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 PHF21BQ96EK2 531 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 P2RY11Q96G91 374 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 MED10Q9BTT4 135 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 MRIQ9BWK5 157 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 LRRC40Q9H9A6 602 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 SELENONQ9NZV5 590 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 SH3GLB1Q9Y371 365 aa9.23□□□□□ -0.93
COPB1-202ENST00000439561 C1orf232A0A0U1RR37 186 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 HEATR9A2RTY3 570 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 CLIC3O95833 236 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 TMED10P49755 219 aaKnown RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 NUMBP49757 651 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 ANO4Q32M45 955 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CERCAMQ5T4B2 595 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 PPP1R26Q5T8A7 1209 aaPredicted RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 PGM2L1Q6PCE3 622 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 ZNF410Q86VK4 478 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 KCNMB4Q86W47 210 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CXorf38Q8TB03 319 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 GAB3Q8WWW8 586 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 ELMO2Q96JJ3 720 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 MAML3Q96JK9 1138 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CPNE1Q99829 537 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 SLC39A3Q9BRY0 314 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 PRDM12Q9H4Q4 367 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 MT-ND1P03886 318 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CDH2P19022 906 aaPredicted RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 C21orf59P57076 290 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CLDN10P78369 228 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 SLC10A2Q12908 348 aaPredicted RBP9.22□□□□□ -0.93
COPB1-202ENST00000439561 TRAF2Q12933 501 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 PRKAA1Q13131 559 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 GRTP1Q5TC63 336 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 IER5Q5VY09 327 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 EFCAB12Q6NXP0 572 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 XKR5Q6UX68 686 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 OFCC1Q8IZS5 231 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 LPGAT1Q92604 370 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 MCRS1Q96EZ8 462 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 ING2Q9H160 280 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 SYNPO2Q9UMS6 1093 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 CNTN6Q9UQ52 1028 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 LAMB2P55268 1798 aa9.22□□□□□ -0.93
COPB1-202ENST00000439561 PDLIM1O00151 329 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 MFSD11O43934 449 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 NPM3O75607 178 aaKnown RBP9.21□□□□□ -0.93
COPB1-202ENST00000439561 SRP72O76094 671 aaKnown RBP9.21□□□□□ -0.93
COPB1-202ENST00000439561 HOXC6P09630 235 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 ARRB2P32121 409 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 ARL2P36404 184 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 SLC6A3Q01959 620 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 TMEM62Q0P6H9 643 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 TUBB3Q13509 450 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 SLC12A1Q13621 1099 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 FASTKQ14296 549 aaKnown RBP9.21□□□□□ -0.93
COPB1-202ENST00000439561 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.93
COPB1-202ENST00000439561 CCDC142Q17RM4 750 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 TBCELQ5QJ74 424 aa9.21□□□□□ -0.93
COPB1-202ENST00000439561 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms