RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CDH4P55283 916 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 TEAD4Q15561 434 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 TRIP6Q15654 476 aaKnown RBP20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 NAA35Q5VZE5 725 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 DBX2Q6ZNG2 339 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 SND1Q7KZF4 910 aaKnown RBP eCLIP20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 ARCQ7LC44 396 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 BNIPLQ7Z465 357 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 OR2T34Q8NGX1 318 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 CPA5Q8WXQ8 436 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 C1orf74Q96LT6 269 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 GBP4Q96PP9 640 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 SPAG5Q96R06 1193 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 TMEM121BQ9BXQ6 578 aaPredicted RBP20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 TM7SF3Q9NS93 570 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 ANKRD6Q9Y2G4 727 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 PAXBP1Q9Y5B6 917 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 SNX11Q9Y5W9 270 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 SNX10Q9Y5X0 201 aa20.88■□□□□ 0.93
NCKIPSD-206ENST00000439518 FAM47DPA6NHR8 397 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 LRRC72A6NJI9 287 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 DRGXA6NNA5 263 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 GOLGA8SH3BPF8 625 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 EPHB6O15197 1021 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 HYAL3O43820 417 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 KRT37O76014 449 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 GFPT2O94808 682 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 PROS1P07225 676 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 CHRNB2P17787 502 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 JAM2P57087 298 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 POLR2FP61218 127 aaKnown RBP20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 ALFQ53S48 1182 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 MSANTD4Q8NCY6 345 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 SLC20A1Q8WUM9 679 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 FAM131CQ96AQ9 280 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 EBF2Q9HAK2 575 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 FAM207AQ9NSI2 230 aaPredicted RBP20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 VPS28Q9UK41 221 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 PCOLCE2Q9UKZ9 415 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 SIK3Q9Y2K2 1263 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 PCDHGB2Q9Y5G2 931 aa20.87■□□□□ 0.93
NCKIPSD-206ENST00000439518 CHD6Q8TD26 2715 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 IGLV3-10A0A075B6K4 115 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 A0A1W2PPC4 97 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 C1QTNF9BB2RNN3 333 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 TRIM16O95361 564 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 IL1BP01584 269 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 CYP1A1P04798 512 aaPredicted RBP20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 C1QTNF9P0C862 333 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 DRD3P35462 400 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 CCR5P51681 352 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 RACK1P63244 317 aaKnown RBP20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 CDR2Q01850 454 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 DLG2Q15700 870 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 ZNF423Q2M1K9 1284 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 KCNT1Q5JUK3 1230 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 FKBP15Q5T1M5 1219 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 ACBD5Q5T8D3 534 aaPredicted RBP20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 LAYNQ6UX15 382 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 UNQ6494/PRO21346Q6UXR6 183 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 GLRX5Q86SX6 157 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 TMPRSS4Q9NRS4 437 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 SLC25A13Q9UJS0 675 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 DAAM1Q9Y4D1 1078 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 NEUROG3Q9Y4Z2 214 aa20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 NYNRINQ9P2P1 1898 aaKnown RBP20.86■□□□□ 0.93
NCKIPSD-206ENST00000439518 ENDOD1O94919 500 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 TPM2P07951 284 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 MMP8P22894 467 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 SOX5P35711 763 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 CTSKP43235 329 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 METAP1P53582 386 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 ADPRHP54922 357 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 FMO1Q01740 532 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 LRSAM1Q6UWE0 723 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 RAB44Q7Z6P3 723 aaPredicted RBP20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 SH2D3CQ8N5H7 860 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 OR8D1Q8WZ84 308 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 GATA6Q92908 595 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 HAPLN3Q96S86 360 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 PSMB7Q99436 277 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 NLRC4Q9NPP4 1024 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 ANO10Q9NW15 660 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 LIMA1Q9UHB6 759 aaKnown RBP20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 SARDHQ9UL12 918 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 HS3ST2Q9Y278 367 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 PCDHB9Q9Y5E1 797 aa20.85■□□□□ 0.93
NCKIPSD-206ENST00000439518 VILLO15195 856 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 ZNF18P17022 549 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 RDXP35241 583 aaKnown RBP20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 COPB1P53618 953 aaKnown RBP20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 ACCSLQ4AC99 568 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 SASS6Q6UVJ0 657 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 LRRC31Q6UY01 552 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 Q6ZVU0 165 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 DSG4Q86SJ6 1040 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 SETD3Q86TU7 594 aaPredicted RBP20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 CHCHD4Q8N4Q1 142 aa20.84■□□□□ 0.93
NCKIPSD-206ENST00000439518 OR14C36Q8NHC7 312 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms