RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BCLAF3A2AJT9 711 aaKnown RBP15.92■□□□□ 0.14
SCARF1-203ENST00000434376 AHCYL1O43865 530 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 RFPL1O75677 317 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 PTPN7P35236 360 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 PNPLA4P41247 253 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 STX3Q13277 289 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 OTUD1Q5VV17 481 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-203ENST00000434376 ARHGAP17Q68EM7 881 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 ALKAL1Q6UXT8 129 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 HSFY1Q96LI6 401 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 SEPT5Q99719 369 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-203ENST00000434376 ZFYVE28Q9HCC9 887 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 BFARQ9NZS9 450 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 TMEM216Q9P0N5 145 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 HMX2A2RU54 273 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 MBLAC1A4D2B0 266 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 OPHN1O60890 802 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 TRPA1O75762 1119 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 PRKCGP05129 697 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 PGM1P36871 562 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 SKIV2L2P42285 1042 aaKnown RBP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 HTRA3P83110 453 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CAP1Q01518 475 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 LAMB3Q13751 1172 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 RASA2Q15283 850 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 LRRC74BQ6ZQY2 392 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 C4orf50Q6ZRC1 276 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 METTL23Q86XA0 190 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 SPATA2LQ8IUW3 424 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 C10orf107Q8IVU9 208 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 RNF148Q8N7C7 305 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 PPP4R1Q8TF05 950 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 HNRNPABQ99729 332 aaKnown RBP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 THTPAQ9BU02 230 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 FTHL17Q9BXU8 183 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CYP4F12Q9HCS2 524 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 DNAJB4Q9UDY4 337 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 E7ESA3 106 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 E9PBE3 544 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 B4GALT3O60512 393 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 KLHL41O60662 606 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 TBX10O75333 385 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 VAPBO95292 243 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 SOX11P35716 441 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CWF19L1Q69YN2 538 aaKnown RBP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CRLF3Q8IUI8 442 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 DENND6AQ8IWF6 608 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 TRPV2Q9Y5S1 764 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 XIRP2A4UGR9 3374 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CCDC160A6NGH7 325 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 CCDC22O60826 627 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 GJB3O75712 270 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 USP1O94782 785 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 FESP07332 822 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 NMBRP28336 390 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 PTPN9P43378 593 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 TAZQ16635 292 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 ARL13BQ3SXY8 428 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 MORN1Q5T089 497 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 NT5DC4Q86YG4 428 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 GIPC2Q8TF65 315 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 QKIQ96PU8 341 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCARF1-203ENST00000434376 NDNQ99608 321 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 BRD8Q9H0E9 1235 aa15.91■□□□□ 0.14
SCARF1-203ENST00000434376 PTPN3P26045 913 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 RASAL3Q86YV0 1011 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 IFNL1Q8IU54 200 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 TTC39CQ8N584 583 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 MTO1Q9Y2Z2 717 aaKnown RBP15.9■□□□□ 0.14
SCARF1-203ENST00000434376 A0A0U1RQS6 177 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 NEK3P51956 506 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 C11orf91Q3C1V1 193 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 RGMBQ6NW40 437 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 PACS1Q6VY07 963 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 TDRPQ86YL5 185 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 CFAP52Q8N1V2 620 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 MCUQ8NE86 351 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 DQX1Q8TE96 717 aaKnown RBP15.9■□□□□ 0.14
SCARF1-203ENST00000434376 MZB1Q8WU39 189 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 GTF3C2Q8WUA4 911 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-203ENST00000434376 NRG4Q8WWG1 115 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 INPP5DQ92835 1189 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 EXOC2Q96KP1 924 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 NPY6RQ99463 290 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 MTG1Q9BT17 334 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-203ENST00000434376 KATNAL1Q9BW62 490 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 PLLPQ9Y342 182 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 ACTL7BQ9Y614 415 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 ACTL7AQ9Y615 435 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 ANK1P16157 1881 aa15.9■□□□□ 0.14
SCARF1-203ENST00000434376 WDR90Q96KV7 1748 aa15.89■□□□□ 0.14
SCARF1-203ENST00000434376 LIN7AO14910 233 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ALDOAP04075 364 aaKnown RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ZFXP17010 805 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 RPL17P18621 184 aaKnown RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 PDE1CQ14123 709 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 RELL1Q8IUW5 271 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF333Q96JL9 665 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms