RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 H2AFZP0C0S5 128 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 EPHB2P29323 1055 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 KRT83P78385 493 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 HNRNPA1L2Q32P51 320 aaKnown RBP23.65■■□□□ 1.38
CLTA-204ENST00000433436 ERMARDQ5T6L9 678 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 H2AFVQ71UI9 128 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 NLRP14Q86W24 1093 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 CTNNBL1Q8WYA6 563 aaPredicted RBP23.65■■□□□ 1.38
CLTA-204ENST00000433436 SIPA1Q96FS4 1042 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 ZC3H10Q96K80 434 aaKnown RBP23.65■■□□□ 1.38
CLTA-204ENST00000433436 PSMB7Q99436 277 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 DHX35Q9H5Z1 703 aaKnown RBP23.65■■□□□ 1.38
CLTA-204ENST00000433436 CD93Q9NPY3 652 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 NDFIP2Q9NV92 336 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 MBD1Q9UIS9 605 aaPredicted RBP23.65■■□□□ 1.38
CLTA-204ENST00000433436 SLC25A13Q9UJS0 675 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 AP4E1Q9UPM8 1137 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 NEU3Q9UQ49 428 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 DMDP11532 3685 aa23.65■■□□□ 1.38
CLTA-204ENST00000433436 ILVBLA1L0T0 632 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 SIN3BO75182 1162 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 ZNF217O75362 1048 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 GNA12Q03113 381 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 PIGHQ14442 188 aaPredicted RBP23.64■■□□□ 1.37
CLTA-204ENST00000433436 ACAP1Q15027 740 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 ELF2Q15723 593 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 CA9Q16790 459 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 ACCSLQ4AC99 568 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 C11orf74Q86VG3 221 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 EPAS1Q99814 870 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 SNRNP25Q9BV90 132 aaKnown RBP23.64■■□□□ 1.37
CLTA-204ENST00000433436 C2orf49Q9BVC5 232 aaPredicted RBP23.64■■□□□ 1.37
CLTA-204ENST00000433436 TMEM248Q9NWD8 314 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 CTTNBP2NLQ9P2B4 639 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 IP6K2Q9UHH9 426 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 VPS51Q9UID3 782 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 USP18Q9UMW8 372 aa23.64■■□□□ 1.37
CLTA-204ENST00000433436 RHOBTB1O94844 696 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 ACADMP11310 421 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 C9orf64Q5T6V5 341 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 ZNF783Q6ZMS7 281 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 ZNF564Q8TBZ8 553 aaPredicted RBP23.63■■□□□ 1.37
CLTA-204ENST00000433436 NCAPGQ9BPX3 1015 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 RETREG1Q9H6L5 497 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 ATP13A1Q9HD20 1204 aa23.63■■□□□ 1.37
CLTA-204ENST00000433436 CKAP5Q14008 2032 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 DOCK4Q8N1I0 1966 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 IGHV1OR15-9A0A0B4J2B8 117 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 EDDM13A0A1B0GTR0 161 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 MYO1FO00160 1098 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 CBX4O00257 560 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 MT-CO1P00395 513 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 RETP07949 1114 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 VAV1P15498 845 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 TCF4P15884 667 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 GLDCP23378 1020 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 PCK1P35558 622 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 MAPKAPK2P49137 400 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 RPS14P62263 151 aaKnown RBP23.62■■□□□ 1.37
CLTA-204ENST00000433436 SEMA3BQ13214 749 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 IL31Q6EBC2 164 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 LINGO4Q6UY18 593 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 CYP4V2Q6ZWL3 525 aaPredicted RBP23.62■■□□□ 1.37
CLTA-204ENST00000433436 TMEFF1Q8IYR6 380 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 DEFB119Q8N690 84 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 DCAF4L2Q8NA75 395 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 PTPRN2Q92932 1015 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 ZWILCHQ9H900 591 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 ITM2CQ9NQX7 267 aa23.62■■□□□ 1.37
CLTA-204ENST00000433436 TARSL2A2RTX5 802 aaKnown RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 TMEM253P0C7T8 217 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 IL1R2P27930 398 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 ACVRL1P37023 503 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 TPMTP51580 245 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 TPI1P60174 286 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 DLG2Q15700 870 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 KCNT1Q5JUK3 1230 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 PMS2CLQ68D20 193 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 METTL3Q86U44 580 aaKnown RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 STK40Q8N2I9 435 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 SH2D3CQ8N5H7 860 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 RTL3Q8N8U3 475 aaKnown RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 ATP11CQ8NB49 1132 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 FRS2Q8WU20 508 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 KCTD15Q96SI1 283 aaPredicted RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 RSPH9Q9H1X1 276 aaPredicted RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 CATSPERBQ9H7T0 1116 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 FBRSQ9HAH7 460 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 USP36Q9P275 1121 aaKnown RBP23.61■■□□□ 1.37
CLTA-204ENST00000433436 UVRAGQ9P2Y5 699 aa23.61■■□□□ 1.37
CLTA-204ENST00000433436 K7ERQ8 282 aa23.6■■□□□ 1.37
CLTA-204ENST00000433436 EEF2KO00418 725 aaKnown RBP23.6■■□□□ 1.37
CLTA-204ENST00000433436 ATP9BO43861 1147 aa23.6■■□□□ 1.37
CLTA-204ENST00000433436 SSR1P43307 286 aaKnown RBP23.6■■□□□ 1.37
CLTA-204ENST00000433436 DHPSP49366 369 aaPredicted RBP23.6■■□□□ 1.37
CLTA-204ENST00000433436 VASPP50552 380 aaPredicted RBP23.6■■□□□ 1.37
CLTA-204ENST00000433436 RPL6Q02878 288 aaKnown RBP23.6■■□□□ 1.37
CLTA-204ENST00000433436 SPEM2Q0P670 501 aa23.6■■□□□ 1.37
CLTA-204ENST00000433436 SMTNL2Q2TAL5 461 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms