RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 LRRC71Q8N4P6 559 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 DCLK2Q8N568 766 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 KLHL23Q8NBE8 558 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 ZBTB44Q8NCP5 570 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 SHCBP1Q8NEM2 672 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 CEP70Q8NHQ1 597 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 AFG1LQ8WV93 481 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 ARHGEF2Q92974 986 aaKnown RBP6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 APIPQ96GX9 242 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 DACH2Q96NX9 599 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 PACSIN1Q9BY11 444 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 C6orf50Q9HD87 102 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 DECR2Q9NUI1 292 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 USP40Q9NVE5 1235 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 DDX18Q9NVP1 670 aaKnown RBP6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 SLC39A10Q9ULF5 831 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 MYH4Q9Y623 1939 aa6.4□□□□□ -1.38
NIPAL3-205ENST00000432012 SMCO2A6NFE2 343 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 C5orf60A6NFR6 353 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 A8MV72 311 aaPredicted RBP6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 TMCO5BA8MYB1 307 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 PAEPP09466 180 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 GOLGA8HP0CJ92 632 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 PRDX5P30044 214 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 MC4RP32245 332 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SERPINF1P36955 418 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 ADH7P40394 386 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 CSE1LP55060 971 aaKnown RBP6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SIGLEC14Q08ET2 396 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 GRIK5Q16478 980 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 ZCWPW2Q504Y3 356 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 MEX3BQ6ZN04 569 aaKnown RBP6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 C8orf86Q6ZUL3 223 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 ZNF765Q7L2R6 523 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 LPCAT2Q7L5N7 544 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 CPNE8Q86YQ8 564 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 CCDC50Q8IVM0 306 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 FUKQ8N0W3 1084 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 ACTRT1Q8TDG2 376 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 TBCKQ8TEA7 893 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SCFD2Q8WU76 684 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SHC3Q92529 594 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 RAD54LQ92698 747 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 FAM84AQ96KN4 292 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SPATA17Q96L03 361 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 MTMR9Q96QG7 549 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 HEPHQ9BQS7 1158 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 SPZ1Q9BXG8 430 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 CRIM1Q9NZV1 1036 aa6.4□□□□□ -1.39
NIPAL3-205ENST00000432012 PRRC2BQ5JSZ5 2229 aaKnown RBP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 KLRF2D3W0D1 207 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 H0YAE9 185 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 RFXAPO00287 272 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 UBE2CO00762 179 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ASNA1O43681 348 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 FMO6PO60774 539 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 DIAPH2O60879 1101 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 KERAO60938 352 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ENDOD1O94919 500 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 AKR1A1P14550 325 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ALOX12P18054 663 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 CST5P28325 142 aaPredicted RBP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 RABIFP47224 123 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 USP11P51784 963 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ZXDAP98168 799 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ID3Q02535 119 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 CALCRLQ16602 461 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 CCDC157Q569K6 752 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ODF2Q5BJF6 829 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 FBXO47Q5MNV8 452 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 AGBL2Q5U5Z8 902 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 C12orf60Q5U649 245 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 DCLRE1AQ6PJP8 1040 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 KDELC1Q6UW63 502 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 MYOCDQ8IZQ8 938 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 FAM133AQ8N9E0 248 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 MAGEC3Q8TD91 643 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 PABPC5Q96DU9 382 aaKnown RBP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 DYNLL2Q96FJ2 89 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 PBKQ96KB5 322 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 COG8Q96MW5 612 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ITPAQ9BY32 194 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 HPF1Q9NWY4 346 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 CHCHD3Q9NX63 227 aaKnown RBP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 AIPL1Q9NZN9 384 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 FETUBQ9UGM5 382 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 SUFUQ9UMX1 484 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 STX8Q9UNK0 236 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 EXOC7Q9UPT5 735 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 ANGPTL3Q9Y5C1 460 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 COL4A6Q14031 1691 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 URADA6NGE7 173 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 K7EPI3 171 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 PGRMC1O00264 195 aaKnown RBP6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 PLOD2O00469 737 aa6.39□□□□□ -1.39
NIPAL3-205ENST00000432012 WNT9AO14904 365 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms