RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ANKRD54Q6NXT1 300 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 B4GALNT4Q76KP1 1039 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CHST9Q7L1S5 443 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 GPR149Q86SP6 731 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 TP53INP2Q8IXH6 220 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CPXM2Q8N436 756 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CCNYQ8ND76 341 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 EDAQ92838 391 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 MYEOVQ96EZ4 313 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CELF6Q96J87 481 aaKnown RBP18.69■□□□□ 0.58
HMGN1-206ENST00000431390 PRICKLE1Q96MT3 831 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-206ENST00000431390 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 PHOX2BQ99453 314 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 TDP1Q9NUW8 608 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 NDFIP2Q9NV92 336 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 PAK5Q9P286 719 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 C5orf60A6NFR6 353 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 GFRA2O00451 464 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CLDN11O75508 207 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 SEC31AO94979 1220 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 VAV1P15498 845 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 HOXB8P17481 243 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CEBPBP17676 345 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 RPL22P35268 128 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 VPS41P49754 854 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CLCN6P51797 869 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 GPS1Q13098 491 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 RARS2Q5T160 578 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 TFAP2DQ7Z6R9 452 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 PRUNE1Q86TP1 453 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CCDC33Q8N5R6 958 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 SH3RF2Q8TEC5 729 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 ART4Q93070 314 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 P2RY11Q96G91 374 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 SLC39A8Q9C0K1 460 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CLEC1BQ9P126 229 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 ZFP37Q9Y6Q3 630 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 NYNRINQ9P2P1 1898 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CHD5Q8TDI0 1954 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 SHROOM3Q8TF72 1996 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 DNALI1O14645 258 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 GCATO75600 419 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 STK10O94804 968 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CCNCP24863 283 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 YBEYP58557 167 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 CAV1Q03135 178 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 EMBQ6PCB8 327 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 PCGF5Q86SE9 256 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 PRSS33Q8NF86 280 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 AENQ8WTP8 325 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 USP13Q92995 863 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 NOL6Q9H6R4 1146 aaKnown RBP18.68■□□□□ 0.58
HMGN1-206ENST00000431390 ARFGAP3Q9NP61 516 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 ZDHHC18Q9NUE0 388 aa18.68■□□□□ 0.58
HMGN1-206ENST00000431390 A0A1B0GVM2 712 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 TYW5A2RUC4 315 aaKnown RBP18.67■□□□□ 0.58
HMGN1-206ENST00000431390 TCAF2A6NFQ2 919 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 DFFAO00273 331 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 OR1E1P30953 314 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 CHKAP35790 457 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 USP4Q13107 963 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 PARP15Q460N3 678 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 ZDHHC24Q6UX98 284 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 CIR1Q86X95 450 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-206ENST00000431390 GSPT2Q8IYD1 628 aaKnown RBP18.67■□□□□ 0.58
HMGN1-206ENST00000431390 CCDC13Q8IYE1 715 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 CFAP52Q8N1V2 620 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 KIAA1958Q8N8K9 716 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 HJURPQ8NCD3 748 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-206ENST00000431390 SMRP1Q8NCR6 262 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 ITFG1Q8TB96 612 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 LRRN4Q8WUT4 740 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 SMG9Q9H0W8 520 aaKnown RBP18.67■□□□□ 0.58
HMGN1-206ENST00000431390 KIF9Q9HAQ2 790 aa18.67■□□□□ 0.58
HMGN1-206ENST00000431390 A0A0A0MRY4 1105 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 TMEM221A6NGB7 291 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 M0R296 226 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 RAMP2O60895 175 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 PLTPP55058 493 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 RPS24P62847 133 aaKnown RBP18.66■□□□□ 0.58
HMGN1-206ENST00000431390 BEND6Q5SZJ8 279 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-206ENST00000431390 IER5LQ5T953 404 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 IZUMO3Q5VZ72 239 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 TIGD7Q6NT04 549 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-206ENST00000431390 SYCE2Q6PIF2 218 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 TRIM67Q6ZTA4 783 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 BBS7Q8IWZ6 715 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 FBXO25Q8TCJ0 367 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 ING5Q8WYH8 240 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 SPATA13Q96N96 652 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 VAT1Q99536 393 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 NEUROG2Q9H2A3 272 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 TPX2Q9ULW0 747 aaKnown RBP18.66■□□□□ 0.58
HMGN1-206ENST00000431390 CCL26Q9Y258 94 aa18.66■□□□□ 0.58
HMGN1-206ENST00000431390 RASA4BC9J798 803 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 TRDMT1O14717 391 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms