RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CCR1P32246 355 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 ARFIP2P53365 341 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 MRPL58Q14197 206 aaKnown RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CHI3L2Q15782 390 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CERCAMQ5T4B2 595 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 SWT1Q5T5J6 900 aaKnown RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 TEDDM1Q5T9Z0 273 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 BTBD8Q5XKL5 378 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 ATG16L1Q676U5 607 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 MBLAC2Q68D91 279 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 NUDCD3Q8IVD9 361 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 LZTR1Q8N653 840 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 ZNF669Q96BR6 464 aaPredicted RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 TBC1D31Q96DN5 1066 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 PTCD3Q96EY7 689 aaKnown RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 SLC39A13Q96H72 371 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 RBBP8Q99708 897 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 TSEN34Q9BSV6 310 aaKnown RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CFHR5Q9BXR6 569 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 C20orf27Q9GZN8 174 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CD248Q9HCU0 757 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 TBC1D13Q9NVG8 400 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 HAO1Q9UJM8 370 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 CEP350Q5VT06 3117 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 A0A0G2JND7 137 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 A0A1W2PQH9 124 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 MAGEB16A2A368 324 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 PSMD3O43242 534 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 CBX6O95503 412 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 PROCP04070 461 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 FGF3P11487 239 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 IBSPP21815 317 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 DNAJB2P25686 324 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 GRIK1P39086 918 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 LIMK2P53671 638 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 SLC39A12Q504Y0 691 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 N4BP2L1Q5TBK1 243 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 ICE2Q659A1 982 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 OR6Y1Q8NGX8 325 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 RNF34Q969K3 372 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 FCRL2Q96LA5 508 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 FCRL5Q96RD9 977 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 KIFC1Q9BW19 673 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 SLC39A8Q9C0K1 460 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 IL22Q9GZX6 179 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 ZNF395Q9H8N7 513 aaPredicted RBP14.24□□□□□ -0.13
HOXC4-202ENST00000430889 KCNK4Q9NYG8 393 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 ZFATQ9P243 1243 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 HEY2Q9UBP5 337 aa14.24□□□□□ -0.13
HOXC4-202ENST00000430889 FAM92AA1XBS5 289 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 A8MUI8 341 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 HNRNPCL1O60812 293 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 ADRA1AP35348 466 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MAGEA11P43364 429 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 TMPRSS15P98073 1019 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 KRT72Q14CN4 511 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 PCLAFQ15004 111 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 LHX8Q68G74 356 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 NAPEPLDQ6IQ20 393 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 OTOP3Q7RTS5 596 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 C14orf80Q86SX3 495 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CLEC14AQ86T13 490 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CCDC117Q8IWD4 279 aaPredicted RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 DCP1BQ8IZD4 617 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MFSD3Q96ES6 412 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 C1orf74Q96LT6 269 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 NOL6Q9H6R4 1146 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CATSPERBQ9H7T0 1116 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 NDFIP2Q9NV92 336 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 FNIP2Q9P278 1114 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 DNAJB4Q9UDY4 337 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 DCDC2Q9UHG0 476 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 HBS1LQ9Y450 684 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 HS3ST4Q9Y661 456 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MIA3Q5JRA6 1907 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 AP3B1O00203 1094 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SYN3O14994 580 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MATN3O15232 486 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 WFS1O76024 890 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SRGAP2BP0DMP2 458 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MYL2P10916 166 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 COL6A1P12109 1028 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SERPINB3P29508 390 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 GPR15P49685 360 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CSE1LP55060 971 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MLLT6P55198 1093 aaPredicted RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CDH17Q12864 832 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 GPNMBQ14956 572 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 FASTKD1Q53R41 847 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 PIK3R6Q5UE93 754 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 RWDD4Q6NW29 188 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms