RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PDE1BQ01064 536 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GBE1Q04446 702 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ARHGAP1Q07960 439 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 IFRD2Q12894 506 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 BMPR2Q13873 1038 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 HNRNPDQ14103 355 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 PAFAH1B3Q15102 231 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ZBTB6Q15916 424 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CA9Q16790 459 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SLC25A52Q3SY17 297 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 HSF5Q4G112 596 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 N4BP2L1Q5TBK1 243 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 FAXCQ5TGI0 409 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 NCBP2-AS2Q69YL0 99 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 TRMT10BQ6PF06 316 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 TTC7BQ86TV6 843 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ACOT1Q86TX2 421 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CDR2LQ86X02 465 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SCUBE3Q8IX30 993 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CCDC33Q8N5R6 958 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 COLGALT1Q8NBJ5 622 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GPRC5AQ8NFJ5 357 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 OR6B3Q8NGW1 331 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 TRAPPC12Q8WVT3 735 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 NLRP7Q8WX94 980 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GATA6Q92908 595 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 VWCEQ96DN2 955 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CPB2Q96IY4 423 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 TNIP3Q96KP6 325 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ZNF560Q96MR9 790 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SLC9A7Q96T83 725 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 MRPL45Q9BRJ2 306 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 MECRQ9BV79 373 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 LRRC40Q9H9A6 602 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 S100A14Q9HCY8 104 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 MRGBPQ9NV56 204 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 NSMCE4AQ9NXX6 385 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 DTLQ9NZJ0 730 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 ARMCX1Q9P291 453 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 FZD10Q9ULW2 581 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 STAP1Q9ULZ2 295 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 UBQLN1Q9UMX0 589 aaKnown RBP8.9□□□□□ -0.98
GABPB1-205ENST00000429662 DNAJC16Q9Y2G8 782 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 SNX9Q9Y5X1 595 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 CFAP47Q6ZTR5 3102 aa8.9□□□□□ -0.98
GABPB1-205ENST00000429662 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.99
GABPB1-205ENST00000429662 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 GOLGA8QA0A0J9YX86 632 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 CCDC189A1A4V9 331 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 WDR27A2RRH5 827 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 GOLGA8OA6NCC3 632 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 PRR5-ARHGAP8B1AHC4 643 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 GOLGA8NF8WBI6 632 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SLCO1B7G3V0H7 640 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 TPP1O14773 563 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 XPO1O14980 1071 aaKnown RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 PEX1O43933 1283 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 UGT1A9O60656 530 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SMIM24O75264 130 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 PROCP04070 461 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 CLTBP09497 229 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 RALBP11234 206 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 FGF3P11487 239 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 TYK2P29597 1187 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 NOS2P35228 1153 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 ADCYAP1R1P41586 468 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 MAGEA12P43365 314 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 POLD2P49005 469 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 HCAR3P49019 387 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 NPY2RP49146 381 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 CACNA2D1P54289 1103 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 ABCE1P61221 599 aaKnown RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 IGBP1P78318 339 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 ARHGAP8P85298 464 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 KDSRQ06136 332 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 BTKQ06187 659 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SLC10A2Q12908 348 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 MTM1Q13496 603 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 TUBB3Q13509 450 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 PDE1CQ14123 709 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-205ENST00000429662 GRB14Q14449 540 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 RABGAP1LQ5R372 815 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 TMEM240Q5SV17 173 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 CASC4Q6P4E1 433 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SLC27A1Q6PCB7 646 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SLC30A9Q6PML9 568 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 PLEKHH3Q7Z736 793 aa8.89□□□□□ -0.99
GABPB1-205ENST00000429662 SETD3Q86TU7 594 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms