RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GRK2P25098 689 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 MAGEA12P43365 314 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 FLT3LGP49771 235 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 CDK7P50613 346 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 CSE1LP55060 971 aaKnown RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 KCNA10Q16322 511 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 ANKRD20A4Q4UJ75 823 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 FAM26DQ5JW98 314 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 MBLAC2Q68D91 279 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 ARHGAP24Q8N264 748 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 FAM13CQ8NE31 585 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 OR10T2Q8NGX3 314 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 PPP4R1Q8TF05 950 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 HASPINQ8TF76 798 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 MLPHQ9BV36 600 aaPredicted RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 TMLHEQ9NVH6 421 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 ARL8BQ9NVJ2 186 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
THBS3-202ENST00000428962 SOX13Q9UN79 622 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 GABRQQ9UN88 632 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 AAR2Q9Y312 384 aaKnown RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 SNX10Q9Y5X0 201 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 GYG2O15488 501 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 USP12O75317 370 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 PROCP04070 461 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 MPOP05164 745 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 HOXC13P31276 330 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 CCR1P32246 355 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 HADHAP40939 763 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 SLC5A3P53794 718 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 CD300LGQ6UXG3 332 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 STRA8Q7Z7C7 330 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 KLHDC9Q8NEP7 349 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 SREK1Q8WXA9 508 aaKnown RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 FCRL3Q96P31 734 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 SNX15Q9NRS6 342 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 EMCNQ9ULC0 261 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 NUMBLQ9Y6R0 609 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 PTPRDP23468 1912 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 ZCWPW2A0A1B0GU75 182 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 ANXA9O76027 345 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 JCHAINP01591 159 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 GRIK1P39086 918 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 AQP5P55064 265 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 CACNB2Q08289 660 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 PCLAFQ15004 111 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 TIGD7Q6NT04 549 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 KCNMB4Q86W47 210 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 DCLK2Q8N568 766 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 MCUR1Q96AQ8 359 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 CELF6Q96J87 481 aaKnown RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 NMUR2Q9GZQ4 415 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 MMADHCQ9H3L0 296 aaPredicted RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 RNPEPL1Q9HAU8 725 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 PPARGC1AQ9UBK2 798 aaKnown RBP13.97□□□□□ -0.17
THBS3-202ENST00000428962 MID2Q9UJV3 735 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
THBS3-202ENST00000428962 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 DFFAO00273 331 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 ATP9BO43861 1147 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 CACNG3O60359 315 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 CABYRO75952 493 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 FGF3P11487 239 aaPredicted RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 SLC1A6P48664 564 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 RPL10AP62906 217 aaKnown RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 IRX4P78413 519 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 MPP3Q13368 585 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 OLIG2Q13516 323 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 PPP2R5DQ14738 602 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 PDPK2PQ6A1A2 396 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 C16orf46Q6P387 395 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 ZNF598Q86UK7 904 aaKnown RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 LRRTM3Q86VH5 581 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 PIWIL2Q8TC59 973 aaKnown RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 DPF3Q92784 378 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 TMEM209Q96SK2 561 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 CFHR5Q9BXR6 569 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 ARHGAP39Q9C0H5 1083 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 SIK2Q9H0K1 926 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 C20orf96Q9NUD7 363 aaPredicted RBP13.96□□□□□ -0.17
THBS3-202ENST00000428962 COPG2Q9UBF2 871 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 MCM8Q9UJA3 840 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 NEU3Q9UQ49 428 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
THBS3-202ENST00000428962 NLRC5Q86WI3 1866 aa13.96□□□□□ -0.18
THBS3-202ENST00000428962 C2orf71A6NGG8 1288 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 H2AFYO75367 372 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms