RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ASIC4Q96FT7 647 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 SNF8Q96H20 258 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 LINC00597Q9H2U6 94 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 PRDM16Q9HAZ2 1276 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 FAM114A2Q9NRY5 505 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
SMC6-204ENST00000428868 DZANK1Q9NVP4 752 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 PLK2Q9NYY3 685 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 WHRNQ9P202 907 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 SH3BP1Q9Y3L3 701 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 BPTFQ12830 3046 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 A0A0A0MRY4 1105 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CFAP69A5D8W1 941 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 GOLGA8MH3BSY2 632 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PPP1R12AO14974 1030 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 MAFKO60675 156 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 BANF1O75531 89 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 SASH3O75995 380 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 FGF19O95750 216 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 LATS1O95835 1130 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PEX11BO96011 259 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PFKLP17858 780 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 FSHRP23945 695 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 FCARP24071 287 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PSMB4P28070 264 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 HOXD9P28356 352 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 CD68P34810 354 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 DRG2P55039 364 aaKnown RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 CDH4P55283 916 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 LMNB2Q03252 620 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 MTM1Q13496 603 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 OLIG2Q13516 323 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CUL1Q13616 776 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ANKRD20A2Q5SQ80 823 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ANKRD20A1Q5TYW2 823 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ANKRD20A3Q5VUR7 823 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CXorf57Q6NSI4 855 aaKnown RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 HIBCHQ6NVY1 386 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 TPGS1Q6ZTW0 290 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ARID3BQ8IVW6 561 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 CCDC13Q8IYE1 715 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 MICALL1Q8N3F8 863 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CARNMT1Q8N4J0 409 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ATPAF2Q8N5M1 289 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CNTD1Q8N815 330 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PRCCQ92733 491 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 SPATA13Q96N96 652 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 S1PR5Q9H228 398 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 TDP1Q9NUW8 608 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 TMEM51Q9NW97 253 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 CLDND1Q9NY35 253 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 DPP7Q9UHL4 492 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 LSM7Q9UK45 103 aaKnown RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 FARP1Q9Y4F1 1045 aaPredicted RBP9.09□□□□□ -0.95
SMC6-204ENST00000428868 RAD54BQ9Y620 910 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 WNT6Q9Y6F9 365 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 PRUNE2Q8WUY3 3088 aa9.09□□□□□ -0.95
SMC6-204ENST00000428868 ZNF106Q9H2Y7 1883 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 A0A1B0GVM2 712 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 TCAF2A6NFQ2 919 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 C5orf60A6NFR6 353 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ZNF197O14709 1029 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 RAMP2O60895 175 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 GCATO75600 419 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 GJB3O75712 270 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 JCHAINP01591 159 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 HLA-DQB2P05538 268 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 RHOCP08134 193 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 NFKB1P19838 968 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 OR1E1P30953 314 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 MAPKAPK2P49137 400 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 NDST2P52849 883 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 BASP1P80723 227 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 SERINC3Q13530 473 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 IHHQ14623 411 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 UAP1Q16222 522 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 CTC1Q2NKJ3 1217 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 FAM78AQ5JUQ0 283 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 RABGAP1LQ5R372 815 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 FYB2Q5VWT5 728 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 TRIM68Q6AZZ1 485 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 ELMSAN1Q6PJG2 1045 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 EP400NLQ6ZTU2 488 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ZNF534Q76KX8 674 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 CHST9Q7L1S5 443 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 TMEM25Q86YD3 366 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 CPXM2Q8N436 756 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMC6-204ENST00000428868 LZTR1Q8N653 840 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 NAT8LQ8N9F0 302 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 TDRD5Q8NAT2 981 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 HJURPQ8NCD3 748 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 FGF13Q92913 245 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ARHGEF2Q92974 986 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms