RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 GP5P40197 560 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 RAB15P59190 212 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 CRADDP78560 199 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 PDK3Q15120 406 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 LRRC36Q1X8D7 754 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 GRTP1Q5TC63 336 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 ZNF280DQ6N043 979 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 RBM44Q6ZP01 1051 aaKnown RBP9.02□□□□□ -0.97
CDH13-202ENST00000428848 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 TMC7Q7Z402 723 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 CLEC14AQ86T13 490 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 NT5DC4Q86YG4 428 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 LINC01465Q8N7H1 131 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 COLGALT1Q8NBJ5 622 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 LSM14AQ8ND56 463 aaKnown RBP9.02□□□□□ -0.97
CDH13-202ENST00000428848 GPRC5AQ8NFJ5 357 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 MAPK15Q8TD08 544 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 KCNK16Q96T55 309 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 CPNE1Q99829 537 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
CDH13-202ENST00000428848 B3GNT5Q9BYG0 378 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 CDH19Q9H159 772 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 DHX35Q9H5Z1 703 aaKnown RBP9.02□□□□□ -0.97
CDH13-202ENST00000428848 COG4Q9H9E3 785 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 CYP4F11Q9HBI6 524 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 VTA1Q9NP79 307 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 DPP3Q9NY33 737 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 ADAM28Q9UKQ2 775 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 ARHGAP26Q9UNA1 814 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 MFHAS1Q9Y4C4 1052 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 NR2E3Q9Y5X4 410 aa9.02□□□□□ -0.97
CDH13-202ENST00000428848 COL1A2P08123 1366 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 C15orf38-AP3S2A0A0A6YYH1 394 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 LOC100653049A0A140TA62 436 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 G3V2L1 256 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 KRT34O76011 436 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 C22orf31O95567 290 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 PORP16435 677 aaPredicted RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 MX2P20592 715 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 VARSP26640 1264 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 TYK2P29597 1187 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 EPHX2P34913 555 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 GMPRP36959 345 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 GLUD2P49448 558 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 OXCT1P55809 520 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 FOLH1Q04609 750 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 PEX6Q13608 980 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 FRG1Q14331 258 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 TRIP10Q15642 601 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 MMEL1Q495T6 779 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 SLC9B1Q4ZJI4 515 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 TCHHL1Q5QJ38 904 aaPredicted RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 KLHDC10Q6PID8 442 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 NAPRTQ6XQN6 538 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 ARPINQ7Z6K5 226 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 TICAM1Q8IUC6 712 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 TMEM126BQ8IUX1 230 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 CCDC185Q8N715 623 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 ZNF781Q8N8C0 355 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 STON2Q8WXE9 905 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 CCDC124Q96CT7 223 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 DNAJC1Q96KC8 554 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 CNDP1Q96KN2 507 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 MRPL45Q9BRJ2 306 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 MRPS26Q9BYN8 205 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 SHCBP1LQ9BZQ2 653 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 SNX15Q9NRS6 342 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 SYBUQ9NX95 663 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 C6orf203Q9P0P8 240 aaPredicted RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 RCOR3Q9P2K3 495 aaPredicted RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 STK39Q9UEW8 545 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 VPS28Q9UK41 221 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 CDY2AQ9Y6F7 541 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 CDY1Q9Y6F8 540 aa9.01□□□□□ -0.97
CDH13-202ENST00000428848 POLR2AP24928 1970 aaKnown RBP9.01□□□□□ -0.97
CDH13-202ENST00000428848 TMEM114B3SHH9 223 aa9□□□□□ -0.97
CDH13-202ENST00000428848 DCXO43602 365 aa9□□□□□ -0.97
CDH13-202ENST00000428848 CLPTM1O96005 669 aa9□□□□□ -0.97
CDH13-202ENST00000428848 PGK2P07205 417 aa9□□□□□ -0.97
CDH13-202ENST00000428848 ARF4P18085 180 aaPredicted RBP9□□□□□ -0.97
CDH13-202ENST00000428848 NCF2P19878 526 aaPredicted RBP9□□□□□ -0.97
CDH13-202ENST00000428848 MLH1P40692 756 aa9□□□□□ -0.97
CDH13-202ENST00000428848 ALDH1A3P47895 512 aa9□□□□□ -0.97
CDH13-202ENST00000428848 CSRP3P50461 194 aa9□□□□□ -0.97
CDH13-202ENST00000428848 SESN2P58004 480 aaPredicted RBP9□□□□□ -0.97
CDH13-202ENST00000428848 CDC42EP1Q00587 391 aa9□□□□□ -0.97
CDH13-202ENST00000428848 CREB5Q02930 508 aa9□□□□□ -0.97
CDH13-202ENST00000428848 TLR1Q15399 786 aa9□□□□□ -0.97
CDH13-202ENST00000428848 SOWAHAQ2M3V2 549 aa9□□□□□ -0.97
CDH13-202ENST00000428848 FSCBQ5H9T9 825 aa9□□□□□ -0.97
CDH13-202ENST00000428848 SPANXN3Q5MJ09 141 aa9□□□□□ -0.97
CDH13-202ENST00000428848 CASC4Q6P4E1 433 aa9□□□□□ -0.97
CDH13-202ENST00000428848 ZNF467Q7Z7K2 595 aaPredicted RBP9□□□□□ -0.97
CDH13-202ENST00000428848 PQLC1Q8N2U9 271 aa9□□□□□ -0.97
CDH13-202ENST00000428848 DCLK2Q8N568 766 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms