RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PRPF19Q9UMS4 504 aaKnown RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 AP3B1O00203 1094 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 MATN2O00339 956 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 XPOTO43592 962 aaKnown RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 RNASEH1O60930 286 aaKnown RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 LRPAP1P30533 357 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PEX19P40855 299 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 POLD2P49005 469 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ZNF33AQ06730 810 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 GALNT2Q10471 571 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ASPHQ12797 758 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 DUSP28Q4G0W2 176 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SLC9B1Q4ZJI4 515 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SFT2D3Q587I9 215 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 UBXN11Q5T124 520 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 OGFRL1Q5TC84 451 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 MAP3K21Q5TCX8 1036 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 THEMIS2Q5TEJ8 643 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SYPL2Q5VXT5 272 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ZYG11AQ6WRX3 759 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 CATSPER4Q7RTX7 472 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PID1Q7Z2X4 250 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 CMC1Q7Z7K0 106 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SLC25A41Q8N5S1 370 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ZNF781Q8N8C0 355 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 RNF169Q8NCN4 708 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 URGCPQ8TCY9 931 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 KCNK16Q96T55 309 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 VAT1Q99536 393 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 MLPHQ9BV36 600 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 IL22Q9GZX6 179 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 DRC3Q9H069 523 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PIH1D1Q9NWS0 290 aaKnown RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 BFARQ9NZS9 450 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 MID2Q9UJV3 735 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FBXW11Q9UKB1 542 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 HES2Q9Y543 173 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 A0A096LPK6 155 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ARHGAP42A6NI28 874 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 TARM1B6A8C7 271 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FAM72CH0Y354 149 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 I6L893 689 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 M0QYT0 321 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 STRNO43815 780 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 BEST1O76090 585 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FBXO21O94952 628 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 BAG2O95816 211 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 C2P06681 752 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SBK3P0C264 359 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SMPD1P17405 629 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ERCC2P18074 760 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 LILRA4P59901 499 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 HERC3Q15034 1050 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 RAB41Q5JT25 222 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 GLRA4Q5JXX5 417 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FAM72AQ5TYM5 149 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FAM72DQ6L9T8 149 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 CES3Q6UWW8 571 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 CLEC20AQ6ZU45 233 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 RSPH3Q86UC2 560 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 FAM72BQ86X60 149 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 TP53INP2Q8IXH6 220 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 DEFB107AQ8IZN7 70 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 CCNYQ8ND76 341 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PIP4K2CQ8TBX8 421 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 MAPK15Q8TD08 544 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 PYDC1Q8WXC3 89 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 NDRG1Q92597 394 aaKnown RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 OPTNQ96CV9 577 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 AGAP2Q99490 1192 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 GPR22Q99680 433 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-204ENST00000428136 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 ANLNQ9NQW6 1124 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 NSMCE4AQ9NXX6 385 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 STK39Q9UEW8 545 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 RAP2CQ9Y3L5 183 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SLC4A7Q9Y6M7 1214 aa8.03□□□□□ -1.12
LRCH3-204ENST00000428136 SORBS2O94875 1100 aaKnown RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 THRAP10827 490 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 COL6A2P12110 1019 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 PTPN1P18031 435 aaKnown RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 ADAM17P78536 824 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 SOX4Q06945 474 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 TBL3Q12788 808 aaKnown RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 DGKDQ16760 1214 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 CCDC117Q8IWD4 279 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 CNTN4Q8IWV2 1026 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 GPRC5AQ8NFJ5 357 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 GDPD5Q8WTR4 605 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 ZNF669Q96BR6 464 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-204ENST00000428136 TSGA13Q96PP4 275 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 KIFC1Q9BW19 673 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 CEP41Q9BYV8 373 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 EPB41L1Q9H4G0 881 aa8.02□□□□□ -1.13
LRCH3-204ENST00000428136 RRN3Q9NYV6 651 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms