RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 PSMA2P25787 234 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 OR1E1P30953 314 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 MPLP40238 635 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 PTGER3P43115 390 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 DHPSP49366 369 aaPredicted RBP17.13■□□□□ 0.33
VRK2-204ENST00000428021 RPL6Q02878 288 aaKnown RBP17.13■□□□□ 0.33
VRK2-204ENST00000428021 CREB5Q02930 508 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 TRIM14Q14142 442 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 SPDYCQ5MJ68 293 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 SCYL2Q6P3W7 929 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 VPS36Q86VN1 386 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 NLRP14Q86W24 1093 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 CACUL1Q86Y37 369 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 DEFB119Q8N690 84 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 FNIP1Q8TF40 1166 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 FRS2Q8WU20 508 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 PTPRN2Q92932 1015 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 TRIM11Q96F44 468 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 FAM129BQ96TA1 746 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 MUC3BQ9H195 1237 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 RSPH9Q9H1X1 276 aaPredicted RBP17.13■□□□□ 0.33
VRK2-204ENST00000428021 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 WSB2Q9NYS7 404 aaPredicted RBP17.13■□□□□ 0.33
VRK2-204ENST00000428021 MYO1AQ9UBC5 1043 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 FZD10Q9ULW2 581 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 USP18Q9UMW8 372 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 CHD5Q8TDI0 1954 aa17.13■□□□□ 0.33
VRK2-204ENST00000428021 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 NYNRINQ9P2P1 1898 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 DCHS1Q96JQ0 3298 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 ATP9BO43861 1147 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 SNAP91O60641 907 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 MT-CO1P00395 513 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 ZNF806P0C7X5 589 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 VAV1P15498 845 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 RHOQP17081 205 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 CD6P30203 668 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 L1CAMP32004 1257 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 SEMA3BQ13214 749 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 ASTE1Q2TB18 679 aaPredicted RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 C6orf118Q5T5N4 469 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 ALKBH5Q6P6C2 394 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 OR7D4Q8NG98 312 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 TOE1Q96GM8 510 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 THAP2Q9H0W7 228 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 SMOC1Q9H4F8 434 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 VPS51Q9UID3 782 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.12■□□□□ 0.33
VRK2-204ENST00000428021 SCINQ9Y6U3 715 aa17.12■□□□□ 0.33
VRK2-204ENST00000428021 ZMPSTE24O75844 475 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 ACADMP11310 421 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 AIF1P55008 147 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 TBX2Q13207 712 aaPredicted RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 EFHC2Q5JST6 749 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 RWDD4Q6NW29 188 aaKnown RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 ZNF783Q6ZMS7 281 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 CYP4V2Q6ZWL3 525 aaPredicted RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 ARMCX6Q7L4S7 300 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 STK40Q8N2I9 435 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 DCAF4L2Q8NA75 395 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 ZNF419Q96HQ0 510 aaPredicted RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 RETREG1Q9H6L5 497 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
VRK2-204ENST00000428021 TMEM248Q9NWD8 314 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 SLC25A13Q9UJS0 675 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 HS3ST2Q9Y278 367 aa17.11■□□□□ 0.33
VRK2-204ENST00000428021 MFAP3LO75121 409 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 CYP1A2P05177 515 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 SRCP12931 536 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 GLDCP23378 1020 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 ITPKAP23677 461 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 OXTRP30559 389 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 NNMTP40261 264 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 ADKP55263 362 aaKnown RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 KRT83P78385 493 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 GNA12Q03113 381 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 ZBTB16Q05516 673 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 DLG2Q15700 870 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 CCDC122Q5T0U0 273 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 ZNF776Q68DI1 518 aaPredicted RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 CYP2U1Q7Z449 544 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 GAS2L3Q86XJ1 694 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 ACE2Q9BYF1 805 aaPredicted RBP17.1■□□□□ 0.33
VRK2-204ENST00000428021 VPS45Q9NRW7 570 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms