RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 CNTN5O94779 1100 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RHOCP08134 193 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 KRT3P12035 628 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 VAV1P15498 845 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 PSMD8P48556 350 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MMP16P51512 607 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 CDH4P55283 916 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 OXCT1P55809 520 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RPS14P62263 151 aaKnown RBP9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RAB6CQ53S08 254 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SPDYCQ5MJ68 293 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SH3PXD2AQ5TCZ1 1133 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 STPG1Q5TH74 334 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 E4F1Q66K89 784 aaPredicted RBP9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 LRRC31Q6UY01 552 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 ARCQ7LC44 396 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 ERMP1Q7Z2K6 904 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 BNIPLQ7Z465 357 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 ZNF683Q8IZ20 524 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RGL4Q8IZJ4 473 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 C3orf20Q8ND61 904 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 OR52K2Q8NGK3 314 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 GANCQ8TET4 914 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SNX19Q92543 992 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RPL10LQ96L21 214 aaKnown RBP9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MCEEQ96PE7 176 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RAB6CQ9H0N0 254 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MUC3BQ9H195 1237 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FSCN3Q9NQT6 498 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 ITM2CQ9NQX7 267 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 WSB2Q9NYS7 404 aaPredicted RBP9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 TAS2R14Q9NYV8 317 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MPP6Q9NZW5 540 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SUN2Q9UH99 717 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SLCO3A1Q9UIG8 710 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 PILRBQ9UKJ0 227 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MYO6Q9UM54 1294 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FRYLO94915 3013 aa9.48□□□□□ -0.89
RFX3-AS1-202ENST00000427722 EDDM13A0A1B0GTR0 161 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MED19A0JLT2 244 aaPredicted RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 TMCO5BA8MYB1 307 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SNAP91O60641 907 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SRGAP2O75044 1071 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 IGLV3-19P01714 112 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 DNTTP04053 509 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 TNFAIP3P21580 790 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 GPD1P21695 349 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MAOBP27338 520 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 OXTRP30559 389 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RFC1P35251 1148 aaPredicted RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 HOXD12P35452 270 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 NNMTP40261 264 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 DPP6P42658 865 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 PTPN9P43378 593 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MAPK8P45983 427 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 LIMK1P53667 647 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 IRX4P78413 519 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FANCCQ00597 558 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SULT2A1Q06520 285 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SLC12A1Q13621 1099 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 CCDC14Q49A88 953 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SYCP2LQ5T4T6 812 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SFMBT2Q5VUG0 894 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 LRSAM1Q6UWE0 723 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MMAAQ8IVH4 418 aaKnown RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 KDM1BQ8NB78 822 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 ALG14Q96F25 216 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 HAPLN3Q96S86 360 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 FEM1AQ9BSK4 669 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SYT11Q9BT88 431 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 TTYH3Q9C0H2 523 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MIR1-1HGQ9H1L0 117 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 RSPH9Q9H1X1 276 aaPredicted RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 PABPC3Q9H361 631 aaKnown RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 EVLQ9UI08 416 aaPredicted RBP9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 SLC25A13Q9UJS0 675 aa9.47□□□□□ -0.89
RFX3-AS1-202ENST00000427722 MUC22E2RYF6 1773 aaPredicted RBP9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 IGLV3-10A0A075B6K4 115 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 A0A0D9SEW6 157 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ANKRD62A6NC57 917 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 C4orf47A7E2U8 309 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 MID1O15344 667 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CCP110O43303 1012 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RNASEH1O60930 286 aaKnown RBP9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ENGP17813 658 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RRM1P23921 792 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ACSL1P33121 698 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ATXN3P54252 364 aaPredicted RBP9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 HDAC4P56524 1084 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 UBASH3AP57075 661 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ZBTB16Q05516 673 aa9.46□□□□□ -0.9
RFX3-AS1-202ENST00000427722 KLHL30Q0D2K2 578 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms