RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 MID1O15344 667 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 SNAP91O60641 907 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 MT-CO1P00395 513 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 CALB1P05937 261 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 SDC4P31431 198 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 CST6Q15828 149 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 WDR45BQ5MNZ6 344 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 ACBD5Q5T8D3 534 aaPredicted RBP18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 FAM72AQ5TYM5 149 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 FAM72DQ6L9T8 149 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 LRRC31Q6UY01 552 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 STRADAQ7RTN6 431 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 TFAP2DQ7Z6R9 452 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 FAM72BQ86X60 149 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 DNAAF5Q86Y56 855 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 MCOLN2Q8IZK6 566 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 PPP1R9BQ96SB3 815 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 SELENOOQ9BVL4 669 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 BTBD1Q9H0C5 482 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 OSBPL2Q9H1P3 480 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 NEUROG2Q9H2A3 272 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 VPS28Q9UK41 221 aa18.83■□□□□ 0.6
SMARCAL1-205ENST00000425815 RHOCP08134 193 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 CCDC172P0C7W6 258 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 TNFAIP3P21580 790 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 RRM1P23921 792 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 SLC8A1P32418 973 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 PBX1P40424 430 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 MAPK8P45983 427 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 METAP1P53582 386 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 RPL7AP62424 266 aaKnown RBP18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 FANCCQ00597 558 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 NRG1Q02297 640 aaPredicted RBP18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 DLG2Q15700 870 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 MANEALQ5VSG8 457 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 USP30Q70CQ3 517 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZNF571Q7Z3V5 609 aaPredicted RBP18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 SETD3Q86TU7 594 aaPredicted RBP18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 AADATQ8N5Z0 425 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 CCDC185Q8N715 623 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 OR2I1PQ8NGU4 316 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 FAM172AQ8WUF8 416 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 ORAI3Q9BRQ5 295 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 PCED1AQ9H1Q7 454 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 SGK2Q9HBY8 427 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 FBXL12Q9NXK8 326 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 PPARGC1AQ9UBK2 798 aaKnown RBP18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 NEU3Q9UQ49 428 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 NUP205Q92621 2012 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 GON4LQ3T8J9 2241 aa18.82■□□□□ 0.6
SMARCAL1-205ENST00000425815 A0A1W2PP55 124 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 K7ERQ8 282 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 ARHGAP33O14559 1287 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 RNASEH1O60930 286 aaKnown RBP18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 KCNK5O95279 499 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 SEMA4FO95754 770 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 SERPINC1P01008 464 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 GPD1P21695 349 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 GLDCP23378 1020 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 OR1E1P30953 314 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 NNMTP40261 264 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 BNC1Q01954 994 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 GFPT1Q06210 699 aaPredicted RBP18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 RABEPKQ7Z6M1 372 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 OR7D4Q8NG98 312 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 MUC3BQ9H195 1237 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 OR12D3Q9UGF7 316 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 EIF2B4Q9UI10 523 aaKnown RBP18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 VPS51Q9UID3 782 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 SARDHQ9UL12 918 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 SCML1Q9UN30 329 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 HS3ST2Q9Y278 367 aa18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.81■□□□□ 0.6
SMARCAL1-205ENST00000425815 ILVBLA1L0T0 632 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 MEI4A8MW99 385 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 DDX3XO00571 662 aaKnown RBP eCLIP18.8■□□□□ 0.62e-7■■□□□ 13.3
SMARCAL1-205ENST00000425815 ZMPSTE24O75844 475 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 SRCP12931 536 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 PRKCIP41743 596 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZNF143P52747 638 aaPredicted RBP18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 GALCP54803 685 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 OGDHQ02218 1023 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ELAVL3Q14576 367 aaKnown RBP18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 UAP1L1Q3KQV9 507 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 DAB2IPQ5VWQ8 1189 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 NLRP14Q86W24 1093 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZCCHC9Q8N567 271 aaKnown RBP18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 BIRC7Q96CA5 298 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 GTPBP2Q9BX10 602 aaKnown RBP18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZYG11BQ9C0D3 744 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 MIR1-1HGQ9H1L0 117 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 SUSD2Q9UGT4 822 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 ADAMTS1Q9UHI8 967 aa18.8■□□□□ 0.6
SMARCAL1-205ENST00000425815 A0A1B0GTW7 788 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 TMCO5BA8MYB1 307 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms