RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 HOOK3Q86VS8 718 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 PSTKQ8IV42 348 aaKnown RBP16.06■□□□□ 0.16
SHOX2-202ENST00000425436 SLC35B2Q8TB61 432 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 FBXL21Q9UKT6 434 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 DNPEPQ9ULA0 475 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 ZNF510Q9Y2H8 683 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 NFS1Q9Y697 457 aa16.06■□□□□ 0.16
SHOX2-202ENST00000425436 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-202ENST00000425436 NFATC1O95644 943 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 CYP17A1P05093 508 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SLC2A3P11169 496 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 ZFXP17010 805 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SLC6A4P31645 630 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 STIP1P31948 543 aaKnown RBP16.05■□□□□ 0.16
SHOX2-202ENST00000425436 ARSEP51690 589 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 CDH6P55285 790 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 PPP2R5DQ14738 602 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 ANO4Q32M45 955 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 ADGRF1Q5T601 910 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 RELL1Q8IUW5 271 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 KIAA1958Q8N8K9 716 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 ATP6V0D2Q8N8Y2 350 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 HSPH1Q92598 858 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 EDAQ92838 391 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 OTUB2Q96DC9 234 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 P2RY11Q96G91 374 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 MAGEB5Q9BZ81 275 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SIK2Q9H0K1 926 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 TMBIM4Q9HC24 238 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 PCDH9Q9HC56 1237 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SPHK2Q9NRA0 654 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SLC12A6Q9UHW9 1150 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
SHOX2-202ENST00000425436 KRBA1A5PL33 1030 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 PAGE1O75459 146 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CD72P21854 359 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CHKAP35790 457 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ITGA8P53708 1063 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ADCY2Q08462 1091 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 FAM133BQ5BKY9 247 aaKnown RBP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ERMARDQ5T6L9 678 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 AGBL2Q5U5Z8 902 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 EMC10Q5UCC4 262 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 RAP1GAP2Q684P5 730 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CPA6Q8N4T0 437 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ARFGAP2Q8N6H7 521 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CCDC185Q8N715 623 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 DNASE1L2Q92874 299 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 AZIN2Q96A70 460 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 MYEOVQ96EZ4 313 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ATP6V1G3Q96LB4 118 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ZNF670Q9BS34 389 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TMEM109Q9BVC6 243 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TRPV5Q9NQA5 729 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ARHGEF38Q9NXL2 777 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 WNT16Q9UBV4 365 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 PIAS3Q9Y6X2 628 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 COL4A2P08572 1712 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 MCF2LO15068 1137 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TGM2P21980 687 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 GJA4P35212 333 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 SGSHP51688 502 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 NR1H3Q13133 447 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 PIK3R6Q5UE93 754 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 SIX5Q8N196 739 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ACTL9Q8TC94 416 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-202ENST00000425436 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 STOML2Q9UJZ1 356 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
SHOX2-202ENST00000425436 MIA3Q5JRA6 1907 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 CFAP69A5D8W1 941 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 SGK1O00141 431 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 LATS1O95835 1130 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 ADH1CP00326 375 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 ADH5P11766 374 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 ALADP13716 330 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 SLC6A11P48066 632 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 AIF1P55008 147 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 OTUD4Q01804 1114 aaKnown RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 ZNF844Q08AG5 666 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 DPYSL3Q14195 570 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 MORF4L2Q15014 288 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 MLF2Q15773 248 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms