RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR52K1Q8NGK4 314 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 MZB1Q8WU39 189 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 CACNG3O60359 315 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 PLD1Q13393 1074 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 TIGD7Q6NT04 549 aaPredicted RBP27.09■■□□□ 1.93
LDB1-202ENST00000425280 OTOP3Q7RTS5 596 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 CHSY1Q86X52 802 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 ANKRD42Q8N9B4 389 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 MGARPQ8TDB4 240 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 TRMT2BQ96GJ1 504 aaKnown RBP27.09■■□□□ 1.93
LDB1-202ENST00000425280 NACA2Q9H009 215 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 TRPM5Q9NZQ8 1165 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 ZNF212Q9UDV6 495 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 PCDHB12Q9Y5F1 795 aa27.09■■□□□ 1.93
LDB1-202ENST00000425280 CXorf49A8MYA2 514 aaPredicted RBP27.08■■□□□ 1.93
LDB1-202ENST00000425280 PRRG1O14668 218 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 COCHO43405 550 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 USP12O75317 370 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 MTA1Q13330 715 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 CASC4Q6P4E1 433 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 TRMT10BQ6PF06 316 aaKnown RBP27.08■■□□□ 1.93
LDB1-202ENST00000425280 KLHDC10Q6PID8 442 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 FOXR1Q6PIV2 292 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 MYEOVQ96EZ4 313 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 OXNAD1Q96HP4 312 aaPredicted RBP27.08■■□□□ 1.93
LDB1-202ENST00000425280 RPRD1AQ96P16 312 aaPredicted RBP27.08■■□□□ 1.93
LDB1-202ENST00000425280 SMYD2Q9NRG4 433 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 SYBUQ9NX95 663 aa27.08■■□□□ 1.93
LDB1-202ENST00000425280 IPO11Q9UI26 975 aaKnown RBP27.08■■□□□ 1.93
LDB1-202ENST00000425280 LILRB3O75022 631 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 TWF1Q12792 350 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 TAF12Q16514 161 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 KLHDC8BQ8IXV7 354 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 TCEAL8Q8IYN2 117 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 CCT8L2Q96SF2 557 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 CASS4Q9NQ75 786 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 DONSONQ9NYP3 566 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 IKBKGQ9Y6K9 419 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 TEX28O15482 410 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 FGF18O76093 207 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 INHBAP08476 426 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 LINC00271P0C7V0 271 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 TACR2P21452 398 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 ELF1P32519 619 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 PRPSAP1Q14558 356 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 VEPH1Q14D04 833 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 LRRC14Q15048 493 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 CIR1Q86X95 450 aaPredicted RBP27.07■■□□□ 1.92
LDB1-202ENST00000425280 CTAGE3PQ8IX95 158 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 PPM1NQ8N819 430 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 HMCESQ96FZ2 354 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 UBP1Q9NZI7 540 aa27.07■■□□□ 1.92
LDB1-202ENST00000425280 NDUFAB1O14561 156 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 SPAG7O75391 227 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 FGBP02675 491 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 HTRA4P83105 476 aaPredicted RBP27.06■■□□□ 1.92
LDB1-202ENST00000425280 SLC26A11Q86WA9 606 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 LRRC6Q86X45 466 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 C4orf33Q8N1A6 199 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 SMC6Q96SB8 1091 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 CCDC134Q9H6E4 229 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 GLOD4Q9HC38 313 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.06■■□□□ 1.92
LDB1-202ENST00000425280 MOCS1Q9NZB8 636 aa27.06■■□□□ 1.92
LDB1-202ENST00000425280 FAM159BA6NKW6 160 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 PGAM1P18669 254 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 CCNJLQ8IV13 435 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 GPR65Q8IYL9 337 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 FIBCD1Q8N539 461 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 ZBP1Q9H171 429 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 LRRC40Q9H9A6 602 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 INSL5Q9Y5Q6 135 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 FAM47DPA6NHR8 397 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 PRPF4O43172 522 aaKnown RBP eCLIP27.05■■□□□ 1.923e-6■■■□□ 16.6
LDB1-202ENST00000425280 ACSL4O60488 711 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 FAM107AO95990 144 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 IFNAR2P48551 515 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 PPIGQ13427 754 aaKnown RBP eCLIP27.05■■□□□ 1.921e-6■■□□□ 12.2
LDB1-202ENST00000425280 CYS1Q717R9 158 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 DNAJB7Q7Z6W7 309 aaPredicted RBP27.05■■□□□ 1.92
LDB1-202ENST00000425280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.05■■□□□ 1.92
LDB1-202ENST00000425280 FCRL5Q96RD9 977 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 NAT9Q9BTE0 207 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 RXFP1Q9HBX9 757 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 MLXIPLQ9NP71 852 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 RBM22Q9NW64 420 aaKnown RBP eCLIP27.05■■□□□ 1.92
LDB1-202ENST00000425280 NKIRAS1Q9NYS0 192 aa27.05■■□□□ 1.92
LDB1-202ENST00000425280 IQANK1A0A1B0GTG1 560 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 FAM155BO75949 473 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 PEX11BO96011 259 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 HLA-DQB2P05538 268 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 UBE2Q1Q7Z7E8 422 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 LGI2Q8N0V4 545 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 SPATA22Q8NHS9 363 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 BADQ92934 168 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 PSMD3O43242 534 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 ALDH1A2O94788 518 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 SLC6A4P31645 630 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 ANO4Q32M45 955 aa27.04■■□□□ 1.92
LDB1-202ENST00000425280 FAM133BQ5BKY9 247 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms